Evidence map›Paper›PMID 27353550›Full record

ArticleScientific reports2016

Biochemical evidence for relaxed substrate specificity of Nα-acetyltransferase (Rv3420c/rimI) of Mycobacterium tuberculosis.

Deepika Pathak, Aadil Hussain Bhat, Vandana Sapehia, Jagdish Rai, Alka Rao

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. NProceedings of the National Academy of Sciences of the United States of America · 2025
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  3. Whole genome sequencing distinguishes skin colonizing from infection-associatedFrontiers in cellular and infection microbiology · 2024
    Article
  4. Article
  5. Article
  6. The role ofFrontiers in cellular and infection microbiology · 2023
    Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Modulation of the bacterial CobB sirtuin deacylase activity by N-terminal acetylation.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. The Journal of biological chemistry · 2020
    Article
  14. Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Deepika PathakCSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, 160036, India.
Aadil Hussain BhatCSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, 160036, India.
Vandana SapehiaCSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, 160036, India.
Jagdish RaiInstitute of Forensic Science &Criminology, Panjab University, Sector 14, Chandigarh, 160014, India.
Alka RaoCSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, 160036, India.
Institute of Microbial Technology · INPanjab University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nα-acetylation is a naturally occurring irreversible modification of N-termini of proteins catalyzed by Nα-acetyltransferases (NATs). Although present in all three domains of life, it is little understood in bacteria. The functional grouping of NATs into six types NatA - NatF, in eukaryotes is based on subunit requirements and stringent substrate specificities. Bacterial orthologs are phylogenetically divergent from eukaryotic NATs, and only a couple of them are characterized biochemically. Accordingly, not much is known about their substrate specificities. Rv3420c of Mycobacterium tuberculosis is a NAT ortholog coding for RimI(Mtb). Using in vitro peptide-based enzyme assays and mass-spectrometry methods, we provide evidence that RimI(Mtb) is a protein Nα-acetyltransferase of relaxed substrate specificity mimicking substrate specificities of eukaryotic NatA, NatC and most competently that of NatE. Also, hitherto unknown acetylation of residues namely, Asp, Glu, Tyr and Leu by a bacterial NAT (RimI(Mtb)) is elucidated, in vitro. Based on in vivo acetylation status, in vitro assay results and genetic context, a plausible cellular substrate for RimI(Mtb) is proposed.

Indexed as

AcetylationAmino Acid SequenceBacterial ProteinsCatalytic DomainModels, MolecularMycobacterium tuberculosisN-Terminal AcetyltransferasesPeptide FragmentsProtein BindingProtein Processing, Post-TranslationalProtein Structure, QuaternarySolutionsSubstrate SpecificityBacterial ProteinsN-Terminal AcetyltransferasesPeptide FragmentsSolutions

Identifiers

PMID27353550
PMCPMC4926160
OpenAlexW2465644915

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.