Evidence map›Paper›PMID 27352031›Full record

ArticlePLoS genetics2016

Misregulation of Alternative Splicing in a Mouse Model of Rett Syndrome.

Ronghui Li, Qiping Dong, Xinni Yuan, Xin Zeng, Yu Gao, Cassandra Chiao, Hongda Li, Xinyu Zhao, Sunduz Keles, Zefeng Wang and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Review
  3. The Role of mRNA Alternative Processing in Mammalian Neurodevelopment.International journal of molecular sciences · 2025
    Review
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  6. Article
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  14. Epigenetics in rare neurological diseases.Frontiers in cell and developmental biology · 2024
    Review
  15. Article
  16. Article
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  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Ronghui LiCMB Training Program, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Qiping DongWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Xinni YuanDepartment of Pharmacology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Xin ZengDepartment of Statistics, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Yu GaoWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Cassandra ChiaoWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.ORCID 0000-0003-4186-0667
Hongda LiWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Xinyu ZhaoWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.ORCID 0000-0002-5128-4424
Sunduz KelesDepartment of Statistics, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Zefeng WangDepartment of Pharmacology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Qiang ChangCMB Training Program, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
University of Wisconsin–Madison · USUniversity of North Carolina at Chapel Hill · US

Funding

WISCONSIN CENTER ON MENTAL RETARDATION: CORE SUPPORTP30HD003352 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI SVAREN, JOHN P · 1985 to 2015
$25.2M
In Vivo Function of Neuronal Activity-Induced MeCP2 phosphorylationR01HD064743 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI CHANG, QIANG · 2010 to 2021
$3.0M
Role of small RNAs in NeurogenesisR01MH080434 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI ZHAO, XINYU · 2007 to 2015
$2.9M
Modulation of VEGF-A alternative splicing as new anti-angiogenic therapeuticsR01CA158283 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WANG, ZEFENG · 2011 to 2015
$1.4M
Coordinate actions between methyl-CpG binding proteins in neuronal developmentR21NS095632 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI ZHAO, XINYU · 2015 to 2016
$418k
Experience-Dependent Redeployment of MeCP2 Across the Mouse GenomeR21HD066560 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI CHANG, QIANG · 2010 to 2011
$401k
Elucidating Molecular Mediators of Environmentally Induced NeurogenesisF32NS094120 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI EISINGER, BRIAN E · 2016 to 2017
$79k
NCI NIH HHS R01 CA158283NICHD NIH HHS P30 HD003352NICHD NIH HHS R01 HD064743NICHD NIH HHS R21 HD066560NIMH NIH HHS R01 MH080434NINDS NIH HHS F32 NS094120NINDS NIH HHS R21 NS095632
6 · The paper itself

Abstract

Mutations in the human MECP2 gene cause Rett syndrome (RTT), a severe neurodevelopmental disorder that predominantly affects girls. Despite decades of work, the molecular function of MeCP2 is not fully understood. Here we report a systematic identification of MeCP2-interacting proteins in the mouse brain. In addition to transcription regulators, we found that MeCP2 physically interacts with several modulators of RNA splicing, including LEDGF and DHX9. These interactions are disrupted by RTT causing mutations, suggesting that they may play a role in RTT pathogenesis. Consistent with the idea, deep RNA sequencing revealed misregulation of hundreds of splicing events in the cortex of Mecp2 knockout mice. To reveal the functional consequence of altered RNA splicing due to the loss of MeCP2, we focused on the regulation of the splicing of the flip/flop exon of Gria2 and other AMPAR genes. We found a significant splicing shift in the flip/flop exon toward the flop inclusion, leading to a faster decay in the AMPAR gated current and altered synaptic transmission. In summary, our study identified direct physical interaction between MeCP2 and splicing factors, a novel MeCP2 target gene, and established functional connection between a specific RNA splicing change and synaptic phenotypes in RTT mice. These results not only help our understanding of the molecular function of MeCP2, but also reveal potential drug targets for future therapies.

Indexed as

Alternative SplicingAnimalsBrainDisease Models, AnimalExonsFemaleMaleMethyl-CpG-Binding Protein 2MiceMice, KnockoutMutationPhenotypeRett SyndromeRNAMethyl-CpG-Binding Protein 2RNA

Identifiers

PMID27352031
PMCPMC4924826
OpenAlexW2469126403

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.