Evidence map›Paper›PMID 27351338›Full record

ArticlePloS one2016

Environmental Factors Modulating the Stability and Enzymatic Activity of the Petrotoga mobilis Esterase (PmEst).

Jose L S Lopes, Juliana S Yoneda, Julia M Martins, Ricardo DeMarco, David M Jameson, Aline M Castro, Nelma R S Bossolan, B A Wallace, Ana P U Araujo

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Jose L S LopesInstituto de Física, Universidade de São Paulo, São Paulo, Brazil.
Juliana S YonedaInstituto de Física, Universidade de São Paulo, São Paulo, Brazil.
Julia M MartinsInstituto de Física de São Carlos, Universidade de São Paulo, São Carlos, Brazil.
Ricardo DeMarcoInstituto de Física de São Carlos, Universidade de São Paulo, São Carlos, Brazil.
David M JamesonDepartment of Cell and Molecular Biology, University of Hawai'i at Manoa, Hawaii, United States of America.
Aline M CastroBiotechnology Division, Research and Development Center, Petrobras, Brazil.
Nelma R S BossolanInstituto de Física de São Carlos, Universidade de São Paulo, São Carlos, Brazil.
B A WallaceInstitute of Structural and Molecular Biology, Birkbeck College, University of London, London, United Kingdom.
Ana P U AraujoInstituto de Física de São Carlos, Universidade de São Paulo, São Carlos, Brazil.
Universidade de São Paulo · BRInstitute of Structural and Molecular Biology · GBPetrobras (Brazil) · BRUniversity of Hawaiʻi at Mānoa · US

Funding

Biotechnology and Biological Sciences Research Council BBS/B/02959
6 · The paper itself

Abstract

Enzymes isolated from thermophilic organisms found in oil reservoirs can find applications in many fields, including the oleochemical, pharmaceutical, bioenergy, and food/dairy industries. In this study, in silico identification and recombinant production of an esterase from the extremophile bacteria Petrotoga mobilis (designated PmEst) were performed. Then biochemical, bioinformatics and structural characterizations were undertaken using a combination of synchrotron radiation circular dichroism (SRCD) and fluorescence spectroscopies to correlate PmEst stability and hydrolytic activity on different substrates. The enzyme presented a high Michaelis-Menten constant (KM 0.16 mM) and optimum activity at ~55°C for p-nitrophenyl butyrate. The secondary structure of PmEst was preserved at acid pH, but not under alkaline conditions. PmEst was unfolded at high concentrations of urea or guanidine through apparently different mechanisms. The esterase activity of PmEst was preserved in the presence of ethanol or propanol and its melting temperature increased ~8°C in the presence of these organic solvents. PmEst is a mesophilic esterase with substrate preference towards short-to medium-length acyl chains. The SRCD data of PmEst is in agreement with the prediction of an α/β protein, which leads us to assume that it displays a typical fold of esterases from this family. The increased enzyme stability in organic solvents may enable novel applications for its use in synthetic biology. Taken together, our results demonstrate features of the PmEst enzyme that indicate it may be suitable for applications in industrial processes, particularly, when the use of polar organic solvents is required.

Indexed as

1-PropanolBacterial ProteinsEnzyme StabilityEsterasesEthanolHydrogen-Ion ConcentrationProtein FoldingRetinal Rod Photoreceptor CellsSubstrate SpecificityUrea1-PropanolBacterial ProteinsEsterasesEthanolUrea

Identifiers

PMID27351338
PMCPMC4924860
OpenAlexW2468838052

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.