Evidence map›Paper›PMID 27351255›Full record

ArticleeLife2016

Developmental programming modulates olfactory behavior in C. elegans via endogenous RNAi pathways.

Jennie R Sims, Maria C Ow, Mailyn A Nishiguchi, Kyuhyung Kim, Piali Sengupta, Sarah E Hall

Abstract read
In one paragraph

Article in eLife, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. A cGAL-UAS bipartite expression toolkit forProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Cells · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jennie R SimsDepartment of Biology, Syracuse University, Syracuse, United States.
Maria C OwDepartment of Biology, Syracuse University, Syracuse, United States.
Mailyn A NishiguchiDepartment of Biology, Syracuse University, Syracuse, United States.
Kyuhyung KimDepartment of Brain and Cognitive Sciences, Daegu Gyeongbuk Institute of Science and Technology, Daegu, Republic of Korea.
Piali SenguptaNational Center for Behavioral Genomics, Department of Biology, Brandeis University, Waltham, United States.
Sarah E HallDepartment of Biology, Syracuse University, Syracuse, United States.ORCID 0000-0002-8536-4000

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Environmental programming of neuronal gene expression by endogenous RNAi pathwaysR15GM111094 · NIGMS · SYRACUSE UNIVERSITY · PI HALL, SARAH E · 2016 to 2016
$446k
Cellular memory of developmental history in C elegansF32GM083593 · NIGMS · BRANDEIS UNIVERSITY · PI HALL, SARAH E · 2008 to 2009
$59k
NIGMS NIH HHS F32 GM083593NIGMS NIH HHS R15 GM111094NIH HHS P40 OD010440
6 · The paper itself

Abstract

Environmental stress during early development can impact adult phenotypes via programmed changes in gene expression. C. elegans larvae respond to environmental stress by entering the stress-resistant dauer diapause pathway and resume development once conditions improve (postdauers). Here we show that the osm-9 TRPV channel gene is a target of developmental programming and is down-regulated specifically in the ADL chemosensory neurons of postdauer adults, resulting in a corresponding altered olfactory behavior that is mediated by ADL in an OSM-9-dependent manner. We identify a cis-acting motif bound by the DAF-3 SMAD and ZFP-1 (AF10) proteins that is necessary for the differential regulation of osm-9, and demonstrate that both chromatin remodeling and endo-siRNA pathways are major contributors to the transcriptional silencing of the osm-9 locus. This work describes an elegant mechanism by which developmental experience influences adult phenotypes by establishing and maintaining transcriptional changes via RNAi and chromatin remodeling pathways.

Indexed as

Behavior, AnimalGene Expression Regulation, DevelopmentalOlfactory PerceptionRNA InterferenceSmellAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsLimbic SystemNerve Tissue ProteinsTRPV Cation ChannelsCaenorhabditis elegans ProteinsNerve Tissue ProteinsOSM-9 protein, C elegansTRPV Cation ChannelsC. eleganschromatinchromosomesdauergenesneuroscienceosm-9postdauerRNAiTGF-beta

Identifiers

PMID27351255
PMCPMC4924998

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.