Evidence map›Paper›PMID 27350614›Full record

ArticleJournal of microbiology (Seoul, Korea)2016

Requirement of the isocitrate lyase gene ICL1 for VPS41-mediated starvation response in Cryptococcus neoformans.

Zhe Xu, Yafei Zhi, Jianzhang Dong, Benfeng Lin, Di Ye, Xiaoguang Liu

Abstract read
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In one paragraph

Article in Journal of microbiology (Seoul, Korea), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Zhe XuKey Laboratory of Industrial Fermentation Microbiology, Ministry of Education, The College of Biotechnology, Tianjin, 300457, P. R. China.
Yafei ZhiKey Laboratory of Industrial Fermentation Microbiology, Ministry of Education, The College of Biotechnology, Tianjin, 300457, P. R. China.
Jianzhang DongKey Laboratory of Industrial Fermentation Microbiology, Ministry of Education, The College of Biotechnology, Tianjin, 300457, P. R. China.
Benfeng LinKey Laboratory of Industrial Fermentation Microbiology, Ministry of Education, The College of Biotechnology, Tianjin, 300457, P. R. China.
Di YeKey Laboratory of Industrial Fermentation Microbiology, Ministry of Education, The College of Biotechnology, Tianjin, 300457, P. R. China.
Xiaoguang LiuLaboratory of Biocatalysis and Biotransformation, The College of Chemical Engineering and Materials Science, Tianjin University of Science and Technology (TUST), Tianjin, 300457, P. R. China. liu_xg@tust.edu.cn.
Tianjin University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cryptococcus neoformans is a major cause of fungal meningitis in individuals with impaired immunity. Our previous studies have shown that the VPS41 gene plays a critical role in the survival of Cryptococcus neoformans under nitrogen starvation; however, the molecular mechanisms underlying VPS41-mediated starvation response remain to be elucidated. In the present study, we show that, under nitrogen starvation, VPS41 strongly enhanced ICL1 expression in C. neoformans and that overexpression of ICL1 in the vps41 mutant dramatically suppressed its defects in starvation response due to the loss of VPS41 function. Moreover, targeted deletion of ICL1 resulted in a dramatic decline in viability of C. neoformans cells under nitrogen deprivation. Taken together, our data suggest a model in which VPS41 up-regulates ICL1 expression, directly or indirectly, to promote survival of C. neoformans under nitrogen starvation.

Indexed as

AnimalsCryptococcosisCryptococcus neoformansFungal ProteinsGene Expression Regulation, FungalHumansIsocitrate LyaseMiceMicrobial ViabilityNitrogenVesicular Transport ProteinsVirulenceFungal ProteinsIsocitrate LyaseNitrogenVesicular Transport ProteinsCryptococcus neoformansICL1nitrogen starvationVPS41

Identifiers

PMID27350614
OpenAlexW2466239433

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.