Evidence map›Paper›PMID 27350367›Full record

ArticleTumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine2016

In silico designing, cloning, and heterologous expression of novel chimeric human B lymphocyte CD20 extra loop.

Mahdi Fasihi-Ramandi, Jafar Amani, Ali-Hatef Salmanian, Seyed Mohammad Moazzeni, Kazem Ahmadi

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Article in Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Mahdi Fasihi-RamandiMolecular biology Research Center, Baqiyatallah University of Medical Sciences, P.O. Box: 19395-5478, Tehran, Iran.
Jafar AmaniApplied Microbiology Research Center, Baqiyatallah University of Medical Sciences, Tehran, Iran.
Ali-Hatef SalmanianDepartment of Agricultural Biotechnology, National Institute of Genetic Engineering and Biotechnology (NIGEB), Tehran, Iran.
Seyed Mohammad MoazzeniImmunology Department, Tarbiat Modares University, Tehran, Iran.
Kazem AhmadiMolecular biology Research Center, Baqiyatallah University of Medical Sciences, P.O. Box: 19395-5478, Tehran, Iran. kazahmadi@yahoo.com.
Baqiyatallah University of Medical Sciences · IRNational Institute of Genetic Engineering and Biotechnology · IRTarbiat Modares University · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Design and production of monoclonal antibody for the diagnosis and immunotherapy of non-Hodgkin lymphoma require a suitable CD20 antigen as an effective immunogen. In this study, a new chimeric human CD20 extra loop (hCD20EXL) protein was designed by bioinformatics tools and was expressed in Escherichia coli BL21 DE3. Amino acid sequences, protein structure, immunogenicity, and other physicochemical property of potential antigens were in silico analyzed. Antigenicity, codon optimization, and other predictions of designed protein were determined by bioinformatics tools. The designed protein was heterologously expressed in E. coli and verified by SDS-PAGE and Western blot. Immunogenicity of this antigen was tested in mice, and reactivity of the antibodies was evaluated using flow cytometry. Experimental analysis confirmed the in silico prediction of the designed chimeric hCD20 in this study. Therefore, based on these results, it is suggested that the new chimeric hCD20 antigen could be an appropriate immunogen for production of monoclonal antibody in immunotherapy purposes.

Indexed as

AnimalsAntibodies, MonoclonalAntigens, CD20B-LymphocytesCloning, MolecularComputational BiologyEscherichia coliFlow CytometryHumansMiceRecombinant Fusion ProteinsAntibodies, MonoclonalAntigens, CD20Recombinant Fusion ProteinsBioinformaticsCD20Heterologous expressionImmunotherapyLymphoma

Identifiers

PMID27350367
OpenAlexW2471626092

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.