Evidence map›Paper›PMID 27350252›Full record

ArticlePlant cell reports2016

Rapid and efficient Agrobacterium-mediated transformation of sorghum (Sorghum bicolor) employing standard binary vectors and bar gene as a selectable marker.

Phat T Do, Hyeyoung Lee, Muruganantham Mookkan, William R Folk, Zhanyuan J Zhang

Abstract read
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Article in Plant cell reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. R2R3 MYB transcription factor SbMYBHv33 negatively regulates sorghum biomass accumulation and salt tolerance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  4. Review
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  7. Article
  8. Review
  9. SbbHLH85, a bHLH member, modulates resilience to salt stress by regulating root hair growth in sorghum.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Progress in Optimization ofInternational journal of molecular sciences · 2018
    Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Phat T DoPlant Transformation Core Facility, Division of Plant Sciences, University of Missouri, 1-33 Agriculture Building, Columbia, MO, 65211, USA.
Hyeyoung LeePlant Transformation Core Facility, Division of Plant Sciences, University of Missouri, 1-33 Agriculture Building, Columbia, MO, 65211, USA.
Muruganantham MookkanPlant Transformation Core Facility, Division of Plant Sciences, University of Missouri, 1-33 Agriculture Building, Columbia, MO, 65211, USA.
William R FolkDepartment of Biochemistry, University of Missouri, Columbia, MO, 65211, USA.
Zhanyuan J ZhangPlant Transformation Core Facility, Division of Plant Sciences, University of Missouri, 1-33 Agriculture Building, Columbia, MO, 65211, USA. zhangzh@missouri.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageA rapid and efficient Agrobacterium -mediated transformation system in sorghum has been developed employing standard binary vectors and bar gene as a selectable marker. Sorghum (Sorghum bicolor) is an important food and biofuel crop worldwide, for which improvements in genetic transformation are needed to study its biology and facilitate agronomic and commercial improvement. Here, we report optimization of regeneration and transformation of public sorghum genotype P898012 using standard binary vectors and bar gene as a selectable marker. The tissue culture regeneration time frame has been reduced to 7-12 weeks with a yield of over 18 plants per callus, and the optimized transformation system employing Agrobacterium tumefaciens strain AGL1 and the bar with a MAS promoter achieved an average frequency over 14 %. Of randomly analyzed independent transgenic events, 40-50 % carry single copy of integrated T-DNA. Some independent transgenic events were derived from the same embryogenic callus lines, but a 3:1 Mendelian segregation ratio was found in all transgenic events with single copy as estimated by Southern blots. The system described here should facilitate studies of sorghum biology and agronomic improvement.

Indexed as

Genes, BacterialTransformation, GeneticAgrobacterium tumefaciensBlotting, SouthernChromosome SegregationGenetic MarkersGenetic VectorsGenotypeGlucuronidaseHerbicidesPlants, Genetically ModifiedPromoter Regions, GeneticRegenerationSorghumStaining and LabelingTissue Culture TechniquesGenetic MarkersGlucuronidaseHerbicidesAgrobacteriumBarPlant transformationSorghumStandard binary vectors

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.