Evidence map›Paper›PMID 27349405›Full record

ArticleScientific reports2016

New insights about pilus formation in gut-adapted Lactobacillus rhamnosus GG from the crystal structure of the SpaA backbone-pilin subunit.

Priyanka Chaurasia, Shivendra Pratap, Ingemar von Ossowski, Airi Palva, Vengadesan Krishnan

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. A global survey of intramolecular isopeptide bonds.Protein science : a publication of the Protein Society · 2025
    Article
  3. Article
  4. Article
  5. Molecular and Cellular Mechanisms Influenced by Postbiotics.International journal of molecular sciences · 2021
    Review
  6. Review
  7. LrpCBA pilus proteins of gut-dwelling Ligilactobacillus ruminis: crystallization and X-ray diffraction analysis.Acta crystallographica. Section F, Structural biology communications · 2021
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Novel Molecular Insights about Lactobacillar Sortase-Dependent Piliation.International journal of molecular sciences · 2017
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Priyanka ChaurasiaRegional Centre for Biotechnology, NCR Biotech Science Cluster, Faridabad-121 001, India.
Shivendra PratapRegional Centre for Biotechnology, NCR Biotech Science Cluster, Faridabad-121 001, India.
Ingemar von OssowskiDepartment of Veterinary Biosciences, University of Helsinki, Helsinki, Finland.
Airi PalvaDepartment of Veterinary Biosciences, University of Helsinki, Helsinki, Finland.
Vengadesan KrishnanRegional Centre for Biotechnology, NCR Biotech Science Cluster, Faridabad-121 001, India.
Regional Centre for Biotechnology · INUniversity of Helsinki · FIManipal Academy of Higher Education · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Thus far, all solved structures of pilin-proteins comprising sortase-assembled pili are from pathogenic genera and species. Here, we present the first crystal structure of a pilin subunit (SpaA) from a non-pathogen host (Lactobacillus rhamnosus GG). SpaA consists of two tandem CnaB-type domains, each with an isopeptide bond and E-box motif. Intriguingly, while the isopeptide bond in the N-terminal domain forms between lysine and asparagine, the one in the C-terminal domain atypically involves aspartate. We also solved crystal structures of mutant proteins where residues implicated in forming isopeptide bonds were replaced. Expectedly, the E-box-substituted E139A mutant lacks an isopeptide bond in the N-terminal domain. However, the C-terminal E269A substitution gave two structures; one of both domains with their isopeptide bonds present, and another of only the N-terminal domain, but with an unformed isopeptide bond and significant conformational changes. This latter crystal structure has never been observed for any other Gram-positive pilin. Notably, the C-terminal isopeptide bond still forms in D295N-substituted SpaA, irrespective of E269 being present or absent. Although E-box mutations affect SpaA proteolytic and thermal stability, a cumulative effect perturbing normal pilus polymerization was unobserved. A model showing the polymerized arrangement of SpaA within the SpaCBA pilus is proposed.

Indexed as

Models, MolecularAmino Acid MotifsAmino Acid SubstitutionCrystallography, X-RayFimbriae, BacterialFimbriae ProteinsLacticaseibacillus rhamnosusMutation, MissenseProtein DomainsProtein StabilityFimbriae Proteins

Identifiers

PMID27349405
PMCPMC4923907
OpenAlexW2471282291

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.