Evidence map›Paper›PMID 27348741›Full record

ArticleEnvironmental microbiology2016

Knock-down of the methyltransferase Kmt6 relieves H3K27me3 and results in induction of cryptic and otherwise silent secondary metabolite gene clusters in Fusarium fujikuroi.

Lena Studt, Sarah M Rösler, Immo Burkhardt, Birgit Arndt, Michael Freitag, Hans-Ulrich Humpf, Jeroen S Dickschat, Bettina Tudzynski

Open access · greenAbstract read
In one paragraph

Article in Environmental microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
11.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 134 citations in OpenAlex.

  1. Article
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  5. Biosynthesis Regulation of Secondary Metabolite Production inJournal of fungi (Basel, Switzerland) · 2025
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  13. Forest health in the Anthropocene: the emergence of a novel tree disease is associated with poplar cultivation.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Article
  14. Article
  15. Non-Mendelian transmission of accessory chromosomes in fungi.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Lena StudtInstitute of Plant Biology and Biotechnology, Westfälische Wilhelms-University Münster, 48143, Münster, Germany.
Sarah M RöslerInstitute of Plant Biology and Biotechnology, Westfälische Wilhelms-University Münster, 48143, Münster, Germany.
Immo BurkhardtKekulé Institute for Organic Chemistry and Biochemistry, Rheinische Friedrich-Wilhelms-University Bonn, 53121, Bonn, Germany.
Birgit ArndtInstitute of Food Chemistry, Westfälische Wilhelms-University Münster, 48149, Münster, Germany.
Michael FreitagDepartment of Biochemistry and Biophysics, Center for Genome Research and Biocomputing, Oregon State University, Corvallis, 97331, OR, USA.
Hans-Ulrich HumpfInstitute of Food Chemistry, Westfälische Wilhelms-University Münster, 48149, Münster, Germany.
Jeroen S DickschatKekulé Institute for Organic Chemistry and Biochemistry, Rheinische Friedrich-Wilhelms-University Bonn, 53121, Bonn, Germany.
Bettina TudzynskiInstitute of Plant Biology and Biotechnology, Westfälische Wilhelms-University Münster, 48143, Münster, Germany.
University of Münster · DEUniversity of Bonn · DEBiocom · US

Funding

Assembly and Maintenance of Centromeres in Filamentous FungiR01GM097637 · NIGMS · OREGON STATE UNIVERSITY · PI FREITAG, MICHAEL · 2011 to 2015
$1.3M
NIGMS NIH HHS R01 GM097637
6 · The paper itself

Abstract

Filamentous fungi produce a vast array of secondary metabolites (SMs) and some play a role in agriculture or pharmacology. Sequencing of the rice pathogen Fusarium fujikuroi revealed the presence of far more SM-encoding genes than known products. SM production is energy-consuming and thus tightly regulated, leaving the majority of SM gene clusters silent under laboratory conditions. One important regulatory layer in SM biosynthesis involves histone modifications that render the underlying genes either silent or poised for transcription. Here, we show that the majority of the putative SM gene clusters in F. fujikuroi are located within facultative heterochromatin marked by trimethylated lysine 27 on histone 3 (H3K27me3). Kmt6, the methyltransferase responsible for establishing this histone mark, appears to be essential in this fungus, and knock-down of Kmt6 in the KMT6

Indexed as

Amino Acid MotifsFungal ProteinsFusariumGene Expression Regulation, FungalGene Knockdown TechniquesHistonesMethyltransferasesMultigene FamilyOryzaPlant DiseasesSecondary MetabolismFungal ProteinsHistonesMethyltransferases

Identifiers

PMID27348741
PMCPMC5118082
OpenAlexW2461460571

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.