Evidence map›Paper›PMID 27348446›Full record

ArticlePlant signaling & behavior2016

Tracking ancestral lineages and recent expansions of NBS-LRR genes in angiosperms.

Zhu-Qing Shao, Bin Wang, Jian-Qun Chen

Open access · bronzeAbstract read
In one paragraph

Article in Plant signaling & behavior, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. TheProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Review
  3. QTL mapping of downy mildew resistance in foxtail millet by SLAF‑seq and BSR-seq analysis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  4. Review
  5. A new comprehensive annotation of leucine-rich repeat-containing receptors in rice.The Plant journal : for cell and molecular biology · 2021
    Article
  6. Review
  7. Article
  8. High Resolution Mapping ofFrontiers in plant science · 2019
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Zhu-Qing Shaoa State Key Laboratory of Pharmaceutical Biotechnology , School of Life Sciences, Nanjing University , Nanjing , China.
Bin Wanga State Key Laboratory of Pharmaceutical Biotechnology , School of Life Sciences, Nanjing University , Nanjing , China.
Jian-Qun Chena State Key Laboratory of Pharmaceutical Biotechnology , School of Life Sciences, Nanjing University , Nanjing , China.
Nanjing University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleotide-Binding Site-Leucine-Rich Repeat (NBS-LRR) genes are the largest plant disease resistance (R) gene family, accounting for ∼80% of more than 140 cloned R genes. Recently, we systematically investigated NBS-LRR genes in 22 angiosperm genomes. By performing phylogenetic analysis of these genes in major angiosperm clades separately and as a whole, we gained strong evidence supporting that angiosperm NBS-LRR genes are derived from 3 anciently separated NBS-LRR classes: RPW8-NBS-LRR (RNL), TIR-NBS-LRR (TNL) and CC-NBS-LRR (CNL). A total of 23 ancestral NBS-LRR lineages gave rise to the current NBS-LRR diversity of angiosperm through dynamic expansions. Comparative analysis of RNL, TNL, and CNL classes revealed that while RNL genes evolved conservatively to maintain its role in defense signal transduction, the latter 2 classes underwent convergent recent expansions in various plant genomes. The revealed evolutionary pattern of angiosperm NBS-LRR genes reflects a long history of competition between plant and pathogen.

Indexed as

Evolution, MolecularGenome, PlantMagnoliopsidaPhylogenyPlant ProteinsSignal TransductionPlant ProteinsCNLNBS-LRR genesrecent expansionRNLTNL

Identifiers

PMID27348446
PMCPMC4991334
OpenAlexW2474182987

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.