Evidence map›Paper›PMID 27347917›Full record

ArticleMolecules (Basel, Switzerland)2016

A Metagenomic Advance for the Cloning and Characterization of a Cellulase from Red Rice Crop Residues.

Carlos Meneses, Bruna Silva, Betsy Medeiros, Rodrigo Serrato, David Johnston-Monje

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. New Bacterial Phytase through Metagenomic Prospection.Molecules (Basel, Switzerland) · 2018
    Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Carlos MenesesDepartament of Biology and Graduate Program in Agricultural Sciences, State University of Paraíba-UEPB, Campina Grande-PB 58429-500, Brazil. chmeneses@gmail.com.
Bruna SilvaGraduate Program in Agricultural Sciences, State University of Paraíba-UEPB, Campina Grande-PB 58429-500, Brazil. bruna-reggina@hotmail.com.
Betsy MedeirosDepartament of Biology, State University of Paraíba-UEPB, Campina Grande-PB 58429-500, Brazil. betsydantas@gmail.com.
Rodrigo SerratoDepartment of Biochemistry and Molecular Biology, Federal University of Paraná-UFPR, Curitiba-PR 81.531-980, Brazil. rvserrato@ufpr.br.
David Johnston-MonjeIndigo Agriculture, Boston, MA 02129, USA. damojomo@gmail.com.
Universidade Estadual da Paraíba · BRIndigo Information Services (United States) · USUniversidade Federal do Paraná · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many naturally-occurring cellulolytic microorganisms are not readily cultivable, demanding a culture-independent approach in order to study their cellulolytic genes. Metagenomics involves the isolation of DNA from environmental sources and can be used to identify enzymes with biotechnological potential from uncultured microbes. In this study, a gene encoding an endoglucanase was cloned from red rice crop residues using a metagenomic strategy. The amino acid identity between this gene and its closest published counterparts is lower than 70%. The endoglucanase was named EglaRR01 and was biochemically characterized. This recombinant protein showed activity on carboxymethylcellulose, indicating that EglaRR01 is an endoactive lytic enzyme. The enzymatic activity was optimal at a pH of 6.8 and at a temperature of 30 °C. Ethanol production from this recombinant enzyme was also analyzed on EglaRR01 crop residues, and resulted in conversion of cellulose from red rice into simple sugars which were further fermented by Saccharomyces cerevisiae to produce ethanol after seven days. Ethanol yield in this study was approximately 8 g/L. The gene found herein shows strong potential for use in ethanol production from cellulosic biomass (second generation ethanol).

Indexed as

Cloning, MolecularGene ExpressionGenomicsBiomassCellulaseCelluloseEnzyme ActivationEthanolFermentationHydrogen-Ion ConcentrationOryzaRecombinant ProteinsSaccharomyces cerevisiaeTemperatureCellulaseCelluloseEthanolRecombinant Proteinsendoglucanasefunctional metagenomicsplant compost

Identifiers

PMID27347917
PMCPMC6274478
OpenAlexW2471465319

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.