ArticlePlant methods2016
An automated, cost-effective and scalable, flood-and-drain based root phenotyping system for cereals.
Article in Plant methods, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.
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Who cites it
7 citing papers in PubMed.
- Microplastics increase cadmium absorption and impair nutrient uptake and growth in red amaranth (Amaranthus tricolor L.) in the presence of cadmium and biochar.BMC plant biology · 2024Article
- Whole Exome Sequencing-Based Identification of a Novel Gene Involved in Root Hair Development in Barley (International journal of molecular sciences · 2021Article
- Metabolic Interactions betweenmSystems · 2021Article
- Root Response to Drought Stress in Rice (International journal of molecular sciences · 2020Review
- ATR, a DNA Damage Signaling Kinase, Is Involved in Aluminum Response in Barley.Frontiers in plant science · 2019Article
- Mutation inFrontiers in plant science · 2017Article
- A Low-Cost Imaging Method for the Temporal and Spatial Colorimetric Detection of Free Amines on Maize Root Surfaces.Frontiers in plant science · 2017Article
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Authors and funding
3 authors.
Funding
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Abstract
backgroundGenetic studies on the molecular mechanisms of the regulation of root growth require the characterisation of a specific root phenotype to be linked with a certain genotype. Such studies using classical labour-intensive methods are severely hindered due to the technical limitations that are associated with the impeded observation of the root system of a plant during its growth. The aim of the research presented here was to develop a reliable, cost-effective method for the analysis of a plant root phenotype that would enable the precise characterisation of the root system architecture of cereals.
resultsThe presented method describes a complete system for automatic supplementation and continuous sensing of culture solution supplied to plants that are grown in transparent tubes containing a solid substrate. The presented system comprises the comprehensive pipeline consisting of a modular-based and remotely-controlled plant growth system and customized imaging setup for root and shoot phenotyping. The system enables an easy extension of the experimental capacity in order to form a combined platform that is comprised of parallel modules, each holding up to 48 plants. The conducted experiments focused on the selection of the most suitable conditions for phenotyping studies in barley: an optimal size of the glass beads, diameters of the acrylic tubes, composition of a medium, and a rate of the medium flow.
conclusionsThe developed system enables an efficient, accurate and highly repeatable analysis of the morphological features of the root system of cereals. Because a simple and fully-automated control system is used, the experimental conditions can easily be normalised for different species of cereals. The scalability of the module-based system allows its capacity to be adjusted in order to meet the requirements of a particular experiment.
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