Evidence map›Paper›PMID 27346148›Full record

ArticleNature communications2016

Pharmacological chaperone reshapes the energy landscape for folding and aggregation of the prion protein.

Amar Nath Gupta, Krishna Neupane, Negar Rezajooei, Leonardo M Cortez, Valerie L Sim, Michael T Woodside

Abstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

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  11. Co-condensation of proteins with single- and double-stranded DNA.Proceedings of the National Academy of Sciences of the United States of America · 2022
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  12. Article
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  15. Unfolded and intermediate states of PrP play a key role in the mechanism of action of an antiprion chaperone.Proceedings of the National Academy of Sciences of the United States of America · 2021
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  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Amar Nath GuptaDepartment of Physics, University of Alberta, Edmonton, Alberta, Canada T6G 2E1.
Krishna NeupaneDepartment of Physics, University of Alberta, Edmonton, Alberta, Canada T6G 2E1.ORCID 0000-0003-1125-1924
Negar RezajooeiDepartment of Physics, University of Alberta, Edmonton, Alberta, Canada T6G 2E1.
Leonardo M CortezDivision of Neurology, Department of Medicine, Centre for Prions and Protein Folding Diseases, and Neuroscience and Mental Health Institute, University of Alberta, Edmonton, Alberta, Canada T6G 2M8.
Valerie L SimDivision of Neurology, Department of Medicine, Centre for Prions and Protein Folding Diseases, and Neuroscience and Mental Health Institute, University of Alberta, Edmonton, Alberta, Canada T6G 2M8.
Michael T WoodsideDepartment of Physics, University of Alberta, Edmonton, Alberta, Canada T6G 2E1.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The development of small-molecule pharmacological chaperones as therapeutics for protein misfolding diseases has proven challenging, partly because their mechanism of action remains unclear. Here we study Fe-TMPyP, a tetrapyrrole that binds to the prion protein PrP and inhibits misfolding, examining its effects on PrP folding at the single-molecule level with force spectroscopy. Single PrP molecules are unfolded with and without Fe-TMPyP present using optical tweezers. Ligand binding to the native structure increases the unfolding force significantly and alters the transition state for unfolding, making it more brittle and raising the barrier height. Fe-TMPyP also binds the unfolded state, delaying native refolding. Furthermore, Fe-TMPyP binding blocks the formation of a stable misfolded dimer by interfering with intermolecular interactions, acting in a similar manner to some molecular chaperones. The ligand thus promotes native folding by stabilizing the native state while also suppressing interactions driving aggregation.

Indexed as

Protein FoldingAnimalsCricetinaeMesocricetusMetalloporphyrinsModels, MolecularMolecular ChaperonesPeptide FragmentsPrionsProtein ConformationPyrrolesMetalloporphyrinsMolecular ChaperonesPeptide Fragmentsprion protein (90-231)PrionsPyrroles

Identifiers

PMID27346148
PMCPMC4931252

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.