Evidence map›Paper›PMID 27345932›Full record

ArticleStructure (London, England : 1993)2016

The Gearbox of the Bacterial Flagellar Motor Switch.

Alessandro Pandini, Faruck Morcos, Shahid Khan

Abstract read
In one paragraph

Article in Structure (London, England : 1993), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Protein ensembles link genotype to phenotype.PLoS computational biology · 2019
    Review
  11. Article
  12. Directional Switching Mechanism of the Bacterial Flagellar Motor.Computational and structural biotechnology journal · 2019
    Review
  13. Article
  14. Article
  15. Article
  16. Switching and Torque Generation in SwarmingFrontiers in microbiology · 2018
    Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Alessandro PandiniDepartment of Computer Science and Synthetic Biology Theme, Brunel University London, Uxbridge UB8 3PH, UK; Computational Cell and Molecular Biology, The Francis Crick Institute, London NW1 1AT, UK.
Faruck MorcosDepartment of Biological Sciences, University of Texas at Dallas, Richardson, TX 75080, USA.
Shahid KhanMolecular Biology Consortium, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA. Electronic address: khan@mbc-als.org.

Funding

Cancer Research UKMedical Research CouncilWellcome Trust
6 · The paper itself

Abstract

Switching of flagellar motor rotation sense dictates bacterial chemotaxis. Multi-subunit FliM-FliG rotor rings couple signal protein binding in FliM with reversal of a distant FliG C-terminal (FliGC) helix involved in stator contacts. Subunit dynamics were examined in conformer ensembles generated by molecular simulations from the X-ray structures. Principal component analysis extracted collective motions. Interfacial loop immobilization by complex formation coupled elastic fluctuations of the FliM middle (FliMM) and FliG middle (FliGM) domains. Coevolved mutations captured interfacial dynamics as well as contacts. FliGM rotation was amplified via two central hinges to the FliGC helix. Intrinsic flexibility, reported by the FliGMC ensembles, reconciled conformers with opposite FliGC helix orientations. FliG domain stacking deformed the inter-domain linker and reduced flexibility; but conformational changes were not triggered by engineered linker deletions that cause a rotation-locked phenotype. These facts suggest that binary rotation states arise from conformational selection by stacking interactions.

Indexed as

Molecular Dynamics SimulationBacterial ProteinsElasticityEvolution, MolecularMutationBacterial ProteinsFlig protein, BacteriaFliM protein, Bacteria

Identifiers

PMID27345932
PMCPMC4938800

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.