Evidence map›Paper›PMID 27343064›Full record

ArticleOrphanet journal of rare diseases2016

A case of fatal Type I congenital disorders of glycosylation (CDG I) associated with low dehydrodolichol diphosphate synthase (DHDDS) activity.

S Sabry, S Vuillaumier-Barrot, E Mintet, M Fasseu, V Valayannopoulos, D Héron, N Dorison, C Mignot, N Seta, I Chantret and 2 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in Orphanet journal of rare diseases, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 1 synthesis or guideline pooled it, 61 citations in OpenAlex.

  1. Pooled it
  2. Review
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  5. Article
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  8. Article
  9. Article
  10. Article
  11. DHDDS and NUS1: A Converging Pathway and Common Phenotype.Movement disorders clinical practice · 2024
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Vertebrate Animal Models of RP59: Current Status and Future Prospects.International journal of molecular sciences · 2022
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 1 country.

S SabryINSERM U1149, Faculté de Médecine Xavier Bichat, 16 rue Henri Huchard, Paris, France.
S Vuillaumier-BarrotINSERM U1149, Faculté de Médecine Xavier Bichat, 16 rue Henri Huchard, Paris, France.
E MintetINSERM U1149, Faculté de Médecine Xavier Bichat, 16 rue Henri Huchard, Paris, France.
M FasseuINSERM U1149, Faculté de Médecine Xavier Bichat, 16 rue Henri Huchard, Paris, France.
V ValayannopoulosDépartement de Pédiatrie, AP-HP, Hôpital Necker-Enfants Malades, Paris, France.
D HéronDépartement de Génétique & Centre de Référence Déficiences Intellectuelles de Causes Rares, Hôpital Pitié Salpétrière, Paris, France.
N DorisonGroupe de Recherche Clinique « Déficience Intellectuelle et Autisme » UPMC, Paris, France.
C MignotDépartement de Génétique & Centre de Référence Déficiences Intellectuelles de Causes Rares, Hôpital Pitié Salpétrière, Paris, France.
N SetaAP-HP, Hôpital Bichat-Claude Bernard, Biochimie, Paris, France.
I ChantretINSERM U1149, Faculté de Médecine Xavier Bichat, 16 rue Henri Huchard, Paris, France.
T DupréINSERM U1149, Faculté de Médecine Xavier Bichat, 16 rue Henri Huchard, Paris, France.
S E H MooreINSERM U1149, Faculté de Médecine Xavier Bichat, 16 rue Henri Huchard, Paris, France. stuart.moore@inserm.fr.
Délégation Paris 7 · FRInserm · FRUniversité Paris Cité · FRHôpital Bichat-Claude-Bernard · FRSorbonne Université · FRUniversité Claude Bernard Lyon 1 · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundType I congenital disorders of glycosylation (CDG-I) are mostly complex multisystemic diseases associated with hypoglycosylated serum glycoproteins. A subgroup harbour mutations in genes necessary for the biosynthesis of the dolichol-linked oligosaccharide (DLO) precursor that is essential for protein N-glycosylation. Here, our objective was to identify the molecular origins of disease in such a CDG-Ix patient presenting with axial hypotonia, peripheral hypertonia, enlarged liver, micropenis, cryptorchidism and sensorineural deafness associated with hypo glycosylated serum glycoproteins.

resultsTargeted sequencing of DNA revealed a splice site mutation in intron 5 and a non-sense mutation in exon 4 of the dehydrodolichol diphosphate synthase gene (DHDDS). Skin biopsy fibroblasts derived from the patient revealed ~20 % residual DHDDS mRNA, ~35 % residual DHDDS activity, reduced dolichol-phosphate, truncated DLO and N-glycans, and an increased ratio of [2-(3)H]mannose labeled glycoprotein to [2-(3)H]mannose labeled DLO. Predicted truncated DHDDS transcripts did not complement rer2-deficient yeast. SiRNA-mediated down-regulation of DHDDS in human hepatocellular carcinoma HepG2 cells largely mirrored the biochemical phenotype of cells from the patient. The patient also harboured the homozygous ALG6(F304S) variant, which does not cause CDG but has been reported to be more frequent in PMM2-CDG patients with severe/fatal disease than in those with moderate presentations. WES did not reveal other strong candidate causal genes.

conclusionsWe describe a patient presenting with severe multisystem disease associated with DHDDS deficiency. As retinitis pigmentosa is the only clinical sign in previously reported cases, this report broadens the spectrum of phenotypes associated with this condition.

Indexed as

Alkyl and Aryl TransferasesChromatography, Thin LayerCongenital Disorders of GlycosylationDolicholsExonsGlycoproteinsGlycosylationHep G2 CellsHumansInfant, NewbornMaleMutationOligosaccharidesPolysaccharidesRNA, Small InterferingSkinAlkyl and Aryl Transferasesdehydrodolicholdehydrodolichyl diphosphate synthetaseDolicholsGlycoproteinsOligosaccharidesPolysaccharidesRNA, Small InterferingDolichol linked oligosaccharideEndoplasmic reticulumProtein N-glycosylationRetinitis pigmentosa

Identifiers

PMID27343064
PMCPMC4919849
OpenAlexW2472606679

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.