Evidence map›Paper›PMID 27341204›Full record

ArticlePloS one2016

Task-Related Edge Density (TED)-A New Method for Revealing Dynamic Network Formation in fMRI Data of the Human Brain.

Gabriele Lohmann, Johannes Stelzer, Verena Zuber, Tilo Buschmann, Daniel Margulies, Andreas Bartels, Klaus Scheffler

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 2 countries.

Gabriele LohmannUniversity Hospital, Department of Biomedical Magnetic Resonance Imaging, University of Tübingen, Tübingen, Germany.
Johannes StelzerUniversity Hospital, Department of Biomedical Magnetic Resonance Imaging, University of Tübingen, Tübingen, Germany.
Verena ZuberEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, United Kingdom.
Tilo BuschmannFraunhofer Institute for Cell Therapy and Immunology, Leipzig, Germany.
Daniel MarguliesMax-Planck-Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.
Andreas BartelsCIN Vision & Cognition Group, Centre for Integrative Neuroscience, Tübingen, Germany.
Klaus SchefflerUniversity Hospital, Department of Biomedical Magnetic Resonance Imaging, University of Tübingen, Tübingen, Germany.
Max Planck Institute for Biological Cybernetics · DEBernstein Center for Computational Neuroscience Tübingen · DEFraunhofer Institute for Cell Therapy and Immunology · DEMax Planck Institute for Human Cognitive and Brain Sciences · DEUniversity of Tübingen · DEWellcome Trust · GB

Funding

Mapping the Human Connectome: Structure, Function, and HeritabilityU54MH091657 · NIMH · WASHINGTON UNIVERSITY · PI UGURBIL, KAMIL, VAN ESSEN, DAVID C · 2010 to 2014
$34.7M
NIMH NIH HHS U54 MH091657
6 · The paper itself

Abstract

The formation of transient networks in response to external stimuli or as a reflection of internal cognitive processes is a hallmark of human brain function. However, its identification in fMRI data of the human brain is notoriously difficult. Here we propose a new method of fMRI data analysis that tackles this problem by considering large-scale, task-related synchronisation networks. Networks consist of nodes and edges connecting them, where nodes correspond to voxels in fMRI data, and the weight of an edge is determined via task-related changes in dynamic synchronisation between their respective times series. Based on these definitions, we developed a new data analysis algorithm that identifies edges that show differing levels of synchrony between two distinct task conditions and that occur in dense packs with similar characteristics. Hence, we call this approach "Task-related Edge Density" (TED). TED proved to be a very strong marker for dynamic network formation that easily lends itself to statistical analysis using large scale statistical inference. A major advantage of TED compared to other methods is that it does not depend on any specific hemodynamic response model, and it also does not require a presegmentation of the data for dimensionality reduction as it can handle large networks consisting of tens of thousands of voxels. We applied TED to fMRI data of a fingertapping and an emotion processing task provided by the Human Connectome Project. TED revealed network-based involvement of a large number of brain areas that evaded detection using traditional GLM-based analysis. We show that our proposed method provides an entirely new window into the immense complexity of human brain function.

Indexed as

Brain MappingMagnetic Resonance ImagingAlgorithmsBrainEmotionsHumansModels, StatisticalOxygenOxygen

Identifiers

PMID27341204
PMCPMC4920409
OpenAlexW2281813000

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.