Evidence map›Paper›PMID 27340355›Full record

ArticleWorld journal of gastroenterology2016

Genomic change in hepatitis B virus associated with development of hepatocellular carcinoma.

Danbi Lee, Heather Lyu, Young-Hwa Chung, Jeong A Kim, Priya Mathews, Elizabeth Jaffee, Lei Zheng, Eunsil Yu, Young Joo Lee, Soo Hyung Ryu

Open access · hybridAbstract read
In one paragraph

Article in World journal of gastroenterology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Hepatitis B virus pre-S/S variants in liver diseases.World journal of gastroenterology · 2018
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Danbi LeeDanbi Lee, Young-Hwa Chung, Jeong A Kim, Department of Internal Medicine, University of Ulsan College of Medicine, Asan Medical Center, Seoul 05505, South Korea.
Heather LyuDanbi Lee, Young-Hwa Chung, Jeong A Kim, Department of Internal Medicine, University of Ulsan College of Medicine, Asan Medical Center, Seoul 05505, South Korea.
Young-Hwa ChungDanbi Lee, Young-Hwa Chung, Jeong A Kim, Department of Internal Medicine, University of Ulsan College of Medicine, Asan Medical Center, Seoul 05505, South Korea.
Jeong A KimDanbi Lee, Young-Hwa Chung, Jeong A Kim, Department of Internal Medicine, University of Ulsan College of Medicine, Asan Medical Center, Seoul 05505, South Korea.
Priya MathewsDanbi Lee, Young-Hwa Chung, Jeong A Kim, Department of Internal Medicine, University of Ulsan College of Medicine, Asan Medical Center, Seoul 05505, South Korea.
Elizabeth JaffeeDanbi Lee, Young-Hwa Chung, Jeong A Kim, Department of Internal Medicine, University of Ulsan College of Medicine, Asan Medical Center, Seoul 05505, South Korea.
Lei ZhengDanbi Lee, Young-Hwa Chung, Jeong A Kim, Department of Internal Medicine, University of Ulsan College of Medicine, Asan Medical Center, Seoul 05505, South Korea.
Eunsil YuDanbi Lee, Young-Hwa Chung, Jeong A Kim, Department of Internal Medicine, University of Ulsan College of Medicine, Asan Medical Center, Seoul 05505, South Korea.
Young Joo LeeDanbi Lee, Young-Hwa Chung, Jeong A Kim, Department of Internal Medicine, University of Ulsan College of Medicine, Asan Medical Center, Seoul 05505, South Korea.
Soo Hyung RyuDanbi Lee, Young-Hwa Chung, Jeong A Kim, Department of Internal Medicine, University of Ulsan College of Medicine, Asan Medical Center, Seoul 05505, South Korea.
Asan Medical Center · KRCreative Research Enterprises (United States) · USUniversity of Ulsan · KRInje University Seoul Paik Hospital · KRJohns Hopkins University · USUlsan College · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo determine the genomic changes in hepatitis B virus (HBV) and evaluate their role in the development of hepatocellular carcinoma (HCC) in patients chronically infected with genotype C HBV.

methodsTwo hundred and forty chronic hepatitis B (CHB) patients were subjected and followed for a median of 105 mo. HCC was diagnosed in accordance with AASLD guidelines. The whole X, S, basal core promoter (BCP), and precore regions of HBV were sequenced using the direct sequencing method.

resultsAll of the subjects were infected with genotype C HBV. Out of 240 CHB patients, 25 (10%) had C1653T and 33 (14%) had T1753V mutation in X region; 157 (65%) had A1762T/G1764A mutations in BCP region, 50 (21%) had G1896A mutation in precore region and 67 (28%) had pre-S deletions. HCC occurred in 6 patients (3%). The prevalence of T1753V mutation was significantly higher in patients who developed HCC than in those without HCC. The cumulative occurrence rates of HCC were 5% and 19% at 10 and 15 years, respectively, in patients with T1753V mutant, which were significantly higher than 1% and 1% in those with wild type HBV (P < 0.001).

conclusionThe presence of T1753V mutation in HBV X-gene significantly increases the risk of HCC development in patients chronically infected with genotype C HBV.

Indexed as

AdultAgedAged, 80 and overCarcinoma, HepatocellularDNA, ViralFemaleFollow-Up StudiesGenotypeHepatitis B, ChronicHepatitis B Core AntigensHepatitis B Surface AntigensHepatitis B virusHumansLiver NeoplasmsMaleMiddle AgedDNA, ViralHepatitis B Core AntigensHepatitis B Surface Antigenshepatitis B virus X proteinTrans-ActivatorsViral Regulatory and Accessory ProteinsChronic hepatitis BGenomic changeGenotype CHepatitis B virusHepatocellular carcinoma

Identifiers

PMID27340355
PMCPMC4910660
OpenAlexW2417858620

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.