Evidence map›Paper›PMID 27340052›Full record

ArticleGenome announcements2016

Draft Genome Sequence of Comamonas thiooxydans Strain PHE2-6 (NBRC 110656), a Chlorinated-Ethene-Degrading Bacterium.

Jun Shimodaira, Kenta Yonezuka, Michiro Tabata, Shun Nagase, Daisuke Kasai, Akira Hosoyama, Atsushi Yamazoe, Nobuyuki Fujita, Masao Fukuda

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genome announcements, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. The Core- and Pan-Genomic Analyses of the GenusFrontiers in microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jun ShimodairaBiological Resource Center, National Institute of Technology and Evaluation, Nishihara, Shibuya-ku, Tokyo, Japan.
Kenta YonezukaDepartment of Bioengineering, Nagaoka University of Technology, Kamitomioka, Nagaoka, Niigata, Japan.
Michiro TabataDepartment of Bioengineering, Nagaoka University of Technology, Kamitomioka, Nagaoka, Niigata, Japan.
Shun NagaseDepartment of Bioengineering, Nagaoka University of Technology, Kamitomioka, Nagaoka, Niigata, Japan.
Daisuke KasaiDepartment of Bioengineering, Nagaoka University of Technology, Kamitomioka, Nagaoka, Niigata, Japan.
Akira HosoyamaBiological Resource Center, National Institute of Technology and Evaluation, Nishihara, Shibuya-ku, Tokyo, Japan.
Atsushi YamazoeBiological Resource Center, National Institute of Technology and Evaluation, Nishihara, Shibuya-ku, Tokyo, Japan.
Nobuyuki FujitaBiological Resource Center, National Institute of Technology and Evaluation, Nishihara, Shibuya-ku, Tokyo, Japan.
Masao FukudaDepartment of Bioengineering, Nagaoka University of Technology, Kamitomioka, Nagaoka, Niigata, Japan masao@vos.nagaokaut.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Comamonas thiooxydans strain PHE2-6 (NBRC 110656), which was isolated from a trichloroethene-contaminated site in Japan, utilizes phenol as a sole source of carbon and cometabolizes cis- and trans-dichloroethenes. We report here the draft genome sequence of this strain, containing 5,309,680 bp, with 60.6% G+C content.

Identifiers

PMID27340052
PMCPMC4919391

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.