Evidence map›Paper›PMID 27336582›Full record

ArticlePLoS genetics2016

Differentiation between MAMP Triggered Defenses in Arabidopsis thaliana.

Madlen Vetter, Talia L Karasov, Joy Bergelson

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
8.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
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  6. Article
  7. Review
  8. Article
  9. Variation in Gene Expression between TwoPlants (Basel, Switzerland) · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Genetic dissection of the maize (Zea mays L.) MAMP response.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
  14. Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Madlen VetterDepartment of Ecology and Evolution, University of Chicago, Chicago, Illinois, United States of America.
Talia L KarasovDepartment of Ecology and Evolution, University of Chicago, Chicago, Illinois, United States of America.
Joy BergelsonDepartment of Ecology and Evolution, University of Chicago, Chicago, Illinois, United States of America.
University of Chicago · US

Funding

The Molecular Basis of Local Adaptation in Arabidopsis thalianaR01GM083068 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI BERGELSON, JOY M · 2008 to 2012
$2.1M
NIGMS NIH HHS R01 GM083068
6 · The paper itself

Abstract

A first line of defense against pathogen attack for both plants and animals involves the detection of microbe-associated molecular patterns (MAMPs), followed by the induction of a complex immune response. Plants, like animals, encode several receptors that recognize different MAMPs. While these receptors are thought to function largely redundantly, the physiological responses to different MAMPs can differ in detail. Responses to MAMP exposure evolve quantitatively in natural populations of Arabidopsis thaliana, perhaps in response to environment specific differences in microbial threat. Here, we sought to determine the extent to which the detection of two canonical MAMPs were evolving redundantly or distinctly within natural populations. Our results reveal negligible correlation in plant growth responses between the bacterial MAMPs EF-Tu and flagellin. Further investigation of the genetic bases of differences in seedling growth inhibition and validation of 11 candidate genes reveal substantial differences in the genetic loci that underlie variation in response to these two MAMPs. Our results indicate that natural variation in MAMP recognition is largely MAMP-specific, indicating an ability to differentially tailor responses to EF-Tu and flagellin in A. thaliana populations.

Indexed as

ArabidopsisArabidopsis ProteinsBase SequenceDNA, PlantFlagellinPathogen-Associated Molecular Pattern MoleculesPeptide Elongation Factor TuPlant DiseasesProtein KinasesPseudomonas syringaeSeedlingsSequence Analysis, DNASignal TransductionArabidopsis ProteinsDNA, PlantFlagellinFLS2 protein, ArabidopsisPathogen-Associated Molecular Pattern MoleculesPeptide Elongation Factor TuProtein Kinases

Identifiers

PMID27336582
PMCPMC4919071
OpenAlexW2466001904

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.