Evidence map›Paper›PMID 27335896›Full record

ArticleJournal of human transcriptome2015

Conservation and tissue-specific transcription patterns of long noncoding RNAs.

Melanie Ward, Callum McEwan, James D Mills, Michael Janitz

Open access · bronzeAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of human transcriptome, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 1 synthesis or guideline pooled it, 110 citations in OpenAlex.

  1. Pooled it
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  16. DNABERT-based explainable lncRNA identification in plant genome assemblies.Computational and structural biotechnology journal · 2023
    Article
  17. Review
  18. Article
  19. Article
  20. A brain-enriched lncRNA shields cancer cells from immune-mediated killing for metastatic colonization in the brain.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Melanie WardSchool of Biotechnology and Biomolecular Sciences, University of New South Wales , Sydney, NSW 2052, Australia.
Callum McEwanSchool of Biotechnology and Biomolecular Sciences, University of New South Wales , Sydney, NSW 2052, Australia.
James D MillsSchool of Biotechnology and Biomolecular Sciences, University of New South Wales , Sydney, NSW 2052, Australia.
Michael JanitzSchool of Biotechnology and Biomolecular Sciences, University of New South Wales , Sydney, NSW 2052, Australia.
UNSW Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Over the past decade, the focus of molecular biology has shifted from being predominately DNA and protein-centric to having a greater appreciation of RNA. It is now accepted that the genome is pervasively transcribed in tissue- and cell-specific manner, to produce not only protein-coding RNAs, but also an array of noncoding RNAs (ncRNAs). Many of these ncRNAs have been found to interact with DNA, protein and other RNA molecules where they exert regulatory functions. Long ncRNAs (lncRNAs) are a subclass of ncRNAs that are particularly interesting due to their cell-specific and species-specific expression patterns and unique conservation patterns. Currently, individual lncRNAs have been classified functionally; however, for the vast majority the functional relevance is unknown. To better categorize lncRNAs, an understanding of their specific expression patterns and evolutionary constraints are needed.

Indexed as

comparative genomicsgene regulationlncRNAsRNA-Seqtranscriptome

Identifiers

PMID27335896
PMCPMC4894084
OpenAlexW2133735311

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.