Evidence map›Paper›PMID 27335320›Full record

ArticleOpen biology2016

Structural and functional analysis of the solute-binding protein UspC from Mycobacterium tuberculosis that is specific for amino sugars.

Elizabeth Fullam, Ivan Prokes, Klaus Fütterer, Gurdyal S Besra

Open access · goldAbstract read
In one paragraph

Article in Open biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Biochemical and phenotypic characterisation of theCell surface (Amsterdam, Netherlands) · 2021
    Article
  4. Article
  5. Review
  6. Review
  7. Physicochemical properties andRSC medicinal chemistry · 2020
    Review
  8. Review
  9. ATP-binding cassette (ABC) import systems ofEmerging microbes & infections · 2020
    Review
  10. Article
  11. Article
  12. Structural and functional determination of homologs of theThe Journal of biological chemistry · 2018
    Article
  13. Modeling the Metabolic State ofFrontiers in cellular and infection microbiology · 2018
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Elizabeth FullamSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, UK School of Biosciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK e.fullam@warwick.ac.uk.ORCID 0000-0001-6245-1614
Ivan ProkesDepartment of Chemistry, University of Warwick, Coventry CV4 7AL, UK.
Klaus FüttererSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK.ORCID 0000-0001-7445-5372
Gurdyal S BesraSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK g.besra@bham.ac.uk.
University of Birmingham · GBUniversity of Warwick · GB

Funding

Medical Research Council MR/K012118/1Wellcome TrustWellcome Trust 104193/Z/14/Z
6 · The paper itself

Abstract

Mycobacterium tuberculosis (Mtb), the aetiological agent of tuberculosis, has evolved to scavenge nutrients from the confined environment of host macrophages with mycobacterial ATP-binding cassette (ABC) transporters playing a key role in nutrient acquisition. Mtb-UspC (Rv2318) is the solute-binding protein of the essential transporter UspABC, one of four Mtb ABC transporters implicated by homology in sugar acquisition. Herein, we report the structural and functional characterization of Mtb-UspC. The 1.5 Å resolution structure of UspC reveals a two subdomain architecture that forms a highly acidic carbohydrate-substrate binding cleft. This has allowed a distinct preference of Mtb-UspC for amino sugars as determined by thermal shift analysis and solution saturation transfer difference-NMR. Taken together our data support the functional assignment of UspABC as an amino-sugar transporter. Given the limited availability of carbohydrates within the phagosomal environmental niche during Mtb intracellular infection, our studies suggest that UspABC enables Mtb to optimize the use of scarce nutrients during intracellular infection, linking essentiality of this protein to a potential role in recycling components of cell-wall peptidoglycan.

Indexed as

Amino SugarsBacterial ProteinsBinding SitesCrystallography, X-RayModels, MolecularMycobacterium tuberculosisProtein BindingProtein Structure, SecondaryAmino SugarsBacterial Proteinsamino sugarsATP-binding cassette transportersMycobacterium tuberculosisnutrient acquisitionpeptidoglycanX-ray crystallography

Identifiers

PMID27335320
PMCPMC4929945
OpenAlexW2460186359

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.