Evidence map›Paper›PMID 27332551›Full record

ArticlePloS one2016

Associations between Common Variants in Iron-Related Genes with Haematological Traits in Populations of African Ancestry.

Wanjiku N Gichohi-Wainaina, Toshiko Tanaka, G Wayne Towers, Hans Verhoef, Jacobien Veenemans, Elise F Talsma, Jan Harryvan, Mark V Boekschoten, Edith J Feskens, Alida Melse-Boonstra

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Ethnic Differences in Iron Status.Advances in nutrition (Bethesda, Md.) · 2021
    Review
  4. Article
  5. Article
  6. Article
  7. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 7 countries.

Wanjiku N Gichohi-WainainaDivision of Human Nutrition, Wageningen University, Wageningen, the Netherlands.ORCID http://orcid.org/0000-0002-3605-0304
Toshiko TanakaTranslational Gerontology Branch, National Institute on Aging, Baltimore, MD, United States of America.
G Wayne TowersCentre of Excellence for Nutrition, North-West University (Potchefstroom campus), Potchefstroom, South Africa.
Hans VerhoefCell Biology and Immunology Group, Wageningen University, Wageningen, The Netherlands.
Jacobien VeenemansLaboratory for Microbiology and Infection Control, Amphia Hospital, Breda, The Netherlands.
Elise F TalsmaDivision of Human Nutrition, Wageningen University, Wageningen, the Netherlands.
Jan HarryvanDivision of Human Nutrition, Wageningen University, Wageningen, the Netherlands.
Mark V BoekschotenNutrition, Metabolism and Genomics group, Division of Human Nutrition, Wageningen University, Wageningen, The Netherlands.
Edith J FeskensDivision of Human Nutrition, Wageningen University, Wageningen, the Netherlands.
Alida Melse-BoonstraDivision of Human Nutrition, Wageningen University, Wageningen, the Netherlands.
Wageningen University & Research · NLAmphia Ziekenhuis · NLInternational Center for Tropical Agriculture · COInternational Institute of Tropical Agriculture · TZLondon School of Hygiene & Tropical Medicine · GBNational Institute on Aging · USNorth-West University · ZA

Funding

The Aging Genome Association Study "AGE-GAIN"ZIAAG000965 · NIA · NATIONAL INSTITUTE ON AGING · PI FERRUCCI, LUIGI · 2009 to 2025
$4.0M
6 · The paper itself

Abstract

backgroundLarge genome-wide association (GWA) studies of European ancestry individuals have identified multiple genetic variants influencing iron status. Studies on the generalizability of these associations to African ancestry populations have been limited. These studies are important given interethnic differences in iron status and the disproportionate burden of iron deficiency among African ancestry populations.

methodsWe tested the associations of 20 previously identified iron status-associated single nucleotide polymorphisms (SNPs) in 628 Kenyans, 609 Tanzanians, 608 South Africans and 228 African Americans. In each study, we examined the associations present between 20 SNPs with ferritin and haemoglobin, adjusting for age, sex and CRP levels.

resultsIn the meta analysis including all 4 African ancestry cohorts, we replicated previously reported associations with lowered haemoglobin concentrations for rs2413450 (β = -0.19, P = 0.02) and rs4820268 (β = -0.16, P = 0.04) in TMPRSS6. An association with increased ferritin concentrations was also confirmed for rs1867504 in TF (β = 1.04, P = <0.0001) in the meta analysis including the African cohorts only.

conclusionsIn all meta analyses, we only replicated 4 of the 20 single nucleotide polymorphisms reported to be associated with iron status in large GWA studies of European ancestry individuals. While there is now evidence for the associations of a number of genetic variants with iron status in both European and African ancestry populations, the considerable lack of concordance highlights the importance of continued ancestry-specific studies to elucidate the genetic underpinnings of iron status in ethnically diverse populations.

Indexed as

Genome-Wide Association StudyAdultBlack or African AmericanBlack PeopleChildChild, PreschoolCohort StudiesFemaleFerritinsGene FrequencyHemoglobinsHumansIronMalePolymorphism, Single NucleotideFerritinsHemoglobinsIron

Identifiers

PMID27332551
PMCPMC4917107
OpenAlexW2466552092

What OpenQuestion holds

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LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.