Evidence map›Paper›PMID 27332126›Full record

ArticleBiophysical journal2016

Exploring the Membrane Potential of Simple Dual-Membrane Systems as Models for Gap-Junction Channels.

Yerko Escalona, Jose A Garate, Raul Araya-Secchi, Tien Huynh, Ruhong Zhou, Tomas Perez-Acle

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Accelerated Molecular Dynamics Applied to the Peptaibol Folding Problem.International journal of molecular sciences · 2019
    Article
  5. Article
  6. Article
  7. Cues to Opening Mechanisms FromFrontiers in molecular neuroscience · 2018
    Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Yerko EscalonaComputational Biology Lab (DLab), Fundación Ciencia & Vida, Santiago, Chile.
Jose A GarateComputational Biology Lab (DLab), Fundación Ciencia & Vida, Santiago, Chile; Centro Interdisciplinario de Neurociencia de Valparaíso (CINV), Universidad de Valparaíso, Valparaíso, Chile.
Raul Araya-SecchiDepartment of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio.
Tien HuynhComputational Biology Center, IBM Thomas J. Watson Research Center, Yorktown Heights, New York.
Ruhong ZhouComputational Biology Center, IBM Thomas J. Watson Research Center, Yorktown Heights, New York.
Tomas Perez-AcleComputational Biology Lab (DLab), Fundación Ciencia & Vida, Santiago, Chile; Centro Interdisciplinario de Neurociencia de Valparaíso (CINV), Universidad de Valparaíso, Valparaíso, Chile. Electronic address: tomas@dlab.cl.
Fundación Ciencia and Vida · CLIBM Research - Thomas J. Watson Research Center · USThe Ohio State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The conductance of ion channels can be modulated by a transmembrane potential difference, due to alterations on ion-mobility and also by changes in the pore structure. Despite the vast knowledge regarding the influence of voltage on transport properties of ion channels, little attention has been paid to describe, with atomic detail, the modulation of ionic transport in gap-junction channels (GJCs). Hence, molecular dynamics simulations were performed to explore the conductance of simple dual-membrane systems that account for the very basic features of GJCs. In doing so, we studied the influence of different charge distributions in the channel surface on these idealized systems under external electric fields, paying attention to the behavior of the electrostatic potential, ion density, ion currents, and equilibrium properties. Our results demonstrate that the incorporation of a charge distribution akin GJCs decreased anionic currents, favoring the transport of cationic species. Moreover, a thermodynamic characterization of ionic transport in these systems demonstrate the existence of a kinetic barrier that hinders anionic currents, reinforcing the role played by the internal arrangement of charges in GJCs. Overall, our results provide insights at the atomic scale on the effects of charge distributions over ionic transport, constituting a step forward into a better understanding of GJCs.

Indexed as

Molecular Dynamics SimulationAnimalsConnexinsGap JunctionsHydrophobic and Hydrophilic InteractionsIon TransportMembrane PotentialsMembranes, ArtificialModels, BiologicalPhosphatidylcholinesStatic ElectricityThermodynamics1-palmitoyl-2-oleoylphosphatidylcholineConnexinsMembranes, ArtificialPhosphatidylcholines

Identifiers

PMID27332126
PMCPMC4919569
OpenAlexW2470565903

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.