Evidence map›Paper›PMID 27331100›Full record

ArticleData in brief2016

Mass-spectrometry data for Rhizoctonia solani proteins produced during infection of wheat and vegetative growth.

Jonathan P Anderson, James K Hane, Thomas Stoll, Nicholas Pain, Marcus L Hastie, Parwinder Kaur, Christine Hoogland, Jeffrey J Gorman, Karam B Singh

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Data in brief, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Improving the Genome Annotation ofCurrent genomics · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jonathan P AndersonCSIRO Agriculture, Floreat, Western Australia; The University of Western Australia Institute of Agriculture, Crawley, Western Australia.
James K HaneCSIRO Agriculture, Floreat, Western Australia.
Thomas StollProtein Discovery Centre, QIMR Berghofer Medical Research Institute, Herston, QLD, Australia.
Nicholas PainCSIRO Agriculture, Floreat, Western Australia.
Marcus L HastieProtein Discovery Centre, QIMR Berghofer Medical Research Institute, Herston, QLD, Australia.
Parwinder KaurCSIRO Agriculture, Floreat, Western Australia.
Christine HooglandProtein Discovery Centre, QIMR Berghofer Medical Research Institute, Herston, QLD, Australia.
Jeffrey J GormanProtein Discovery Centre, QIMR Berghofer Medical Research Institute, Herston, QLD, Australia.
Karam B SinghCSIRO Agriculture, Floreat, Western Australia; The University of Western Australia Institute of Agriculture, Crawley, Western Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rhizoctonia solani is an important root infecting pathogen of a range of food staples worldwide including wheat, rice, maize, soybean, potato, legumes and others. Conventional resistance breeding strategies are hindered by the absence of tractable genetic resistance in any crop host. Understanding the biology and pathogenicity mechanisms of this fungus is important for addressing these disease issues, however, little is known about how R. solani causes disease. The data described in this article is derived from applying mass spectrometry based proteomics to identify soluble, membrane-bound and culture filtrate proteins produced under wheat infection and vegetative growth conditions. Comparisons of the data for sample types in this set will be useful to identify metabolic pathway changes as the fungus switches from saprophytic to a pathogenic lifestyle or pathogenicity related proteins contributing to the ability to cause disease on wheat. The data set is deposited in the PRIDE archive under identifier PRIDE: PXD002806.

Indexed as

BasidiomyceteFungal pathogenesisRhizoctonia solaniWheat

Identifiers

PMID27331100
PMCPMC4906030

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.