Evidence map›Paper›PMID 27330114›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Photoreceptor effects on plant biomass, resource allocation, and metabolic state.

Deyue Yang, Daniel D Seaton, Johanna Krahmer, Karen J Halliday

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
28.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 130 citations in OpenAlex.

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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Deyue YangSynthSys, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, United Kingdom.
Daniel D SeatonSynthSys, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, United Kingdom.
Johanna KrahmerSynthSys, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, United Kingdom.
Karen J HallidaySynthSys, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, United Kingdom karen.halliday@ed.ac.uk.
Carnegie Institution for Science · USUniversity of Edinburgh · GB

Funding

Biotechnology and Biological Sciences Research Council BB/F005237/1
6 · The paper itself

Abstract

Plants sense the light environment through an ensemble of photoreceptors. Members of the phytochrome class of light receptors are known to play a critical role in seedling establishment, and are among the best-characterized plant signaling components. Phytochromes also regulate adult plant growth; however, our knowledge of this process is rather fragmented. This study demonstrates that phytochrome controls carbon allocation and biomass production in the developing plant. Phytochrome mutants have a reduced CO2 uptake, yet overaccumulate daytime sucrose and starch. This finding suggests that even though carbon fixation is impeded, the available carbon resources are not fully used for growth during the day. Supporting this notion, phytochrome depletion alters the proportion of day:night growth. In addition, phytochrome loss leads to sizeable reductions in overall growth, dry weight, total protein levels, and the expression of CELLULOSE SYNTHASE-LIKE genes. Because cellulose and protein are major constituents of plant biomass, our data point to an important role for phytochrome in regulating these fundamental components of plant productivity. We show that phytochrome loss impacts core metabolism, leading to elevated levels of tricarboxylic acid cycle intermediates, amino acids, sugar derivatives, and notably the stress metabolites proline and raffinose. Furthermore, the already growth-retarded phytochrome mutants are less responsive to growth-inhibiting abiotic stresses and have elevated expression of stress marker genes. This coordinated response appears to divert resources from energetically costly biomass production to improve resilience. In nature, this strategy may be activated in phytochrome-disabling, vegetation-dense habitats to enhance survival in potentially resource-limiting conditions.

Indexed as

ArabidopsisCarbohydrate MetabolismCarbon DioxidePhytochromeStress, PhysiologicalCarbon DioxidePhytochromeArabidopsis thalianagrowthlightphytochromesucrose

Identifiers

PMID27330114
PMCPMC4941476
OpenAlexW2461228237

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.