Evidence map›Paper›PMID 27330079›Full record

ArticleThe Journal of biological chemistry2016

Modulating the Structure and Function of an Aminoacyl-tRNA Synthetase Cofactor by Biotinylation.

Chih-Yao Chang, Chia-Pei Chang, Shruti Chakraborty, Shao-Win Wang, Yi-Kuan Tseng, Chien-Chia Wang

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 3 countries.

Chih-Yao ChangFrom the Department of Life Sciences and.ORCID 0000-0002-6688-1520
Chia-Pei ChangFrom the Department of Life Sciences and.ORCID 0000-0002-1412-9652
Shruti Chakrabortythe Department of Biotechnology, University of Calcutta, Kolkata 700019, India, and.
Shao-Win Wangthe Division of Molecular and Genomic Medicine, National Health Research Institutes, Zhunan Town, Miaoli 35053, Taiwan.
Yi-Kuan Tsengthe Graduate Institute of Statistics, National Central University, Jungli District, Taoyuan 32001, Taiwan.
Chien-Chia WangFrom the Department of Life Sciences and dukewang@cc.ncu.edu.tw.ORCID 0000-0002-7104-1307
Enzo Life Sciences (United States) · USDuke University · USNational Central University · TWNational Health Research Institutes · TWUniversity of Calcutta · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arc1p is a yeast-specific tRNA-binding protein that forms a ternary complex with glutamyl-tRNA synthetase (GluRSc) and methionyl-tRNA synthetase (MetRS) in the cytoplasm to regulate their catalytic activities and subcellular distributions. Despite Arc1p not being involved in any known biotin-dependent reaction, it is a natural target of biotin modification. Results presented herein show that biotin modification had no obvious effect on the growth-supporting activity, subcellular distribution, tRNA binding, or interactions of Arc1p with GluRSc and MetRS. Nevertheless, biotinylation of Arc1p was temperature dependent; raising the growth temperature from 30 to 37 °C drastically reduced its biotinylation level. As a result, Arc1p purified from a yeast culture that had been grown overnight at 37 °C was essentially biotin free. Non-biotinylated Arc1p was more heat stable, more flexible in structure, and more effective than its biotinylated counterpart in promoting glutamylation activity of the otherwise inactive GluRSc at 37 °C in vitro Our study suggests that the structure and function of Arc1p can be modulated via biotinylation in response to temperature changes.

Indexed as

BiotinylationHot TemperatureGlutamate-tRNA LigaseMethionine-tRNA LigaseProtein StabilityRNA-Binding ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsARC1 protein, S cerevisiaeGlutamate-tRNA LigaseMethionine-tRNA LigaseRNA-Binding ProteinsSaccharomyces cerevisiae Proteinsaminoacyl tRNA synthetasebiotinpost-translational modification (PTM)protein synthesistransfer RNA (tRNA)

Identifiers

PMID27330079
PMCPMC5016114
OpenAlexW2471257371

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.