Evidence map›Paper›PMID 27329311›Full record

ArticleMicroscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada2016

Collagen Fibril Ultrastructure in Mice Lacking Discoidin Domain Receptor 1.

Jeffrey R Tonniges, Benjamin Albert, Edward P Calomeni, Shuvro Roy, Joan Lee, Xiaokui Mo, Susan E Cole, Gunjan Agarwal

Open access · greenAbstract read
In one paragraph

Article in Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Effects of fixatives on histomagnetic evaluation of iron in rodent spleen.Journal of magnetism and magnetic materials · 2021
    Article
  7. Article
  8. Article
  9. Modulation of biomimetic mineralization of collagen by soluble ectodomain of discoidin domain receptor 2.Materials science & engineering. C, Materials for biological applications · 2019
    Article
  10. Article
  11. Article
  12. Article
  13. Magnetic mapping of iron in rodent spleen.Nanomedicine : nanotechnology, biology, and medicine · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jeffrey R Tonniges1Biophysics Graduate Program,The Ohio State University,Columbus,OH 43210,USA.
Benjamin Albert2Biomedical Engineering Department,The Ohio State University,Columbus,OH 43210,USA.
Edward P Calomeni3Department of Pathology,The Ohio State University,Columbus,OH 43210,USA.
Shuvro Roy4David Heart and Lung Research Institute,The Ohio State University,Columbus,OH 43210,USA.
Joan Lee4David Heart and Lung Research Institute,The Ohio State University,Columbus,OH 43210,USA.
Xiaokui Mo5Center for Biostatistics,The Ohio State University,Columbus,OH 43210,USA.
Susan E Cole6Department of Molecular Genetics,The Ohio State University,Columbus,OH 43210,USA.
Gunjan Agarwal2Biomedical Engineering Department,The Ohio State University,Columbus,OH 43210,USA.
The Ohio State University · USLung Institute · US

Funding

Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Tasleem J Padamsee · 1985 to 2026
$132.3M
The Ohio State University Center for clinical and Translational ScienceUL1TR001070 · NCATS · OHIO STATE UNIVERSITY · PI JACKSON, REBECCA D · 2013 to 2017
$22.6M
NCATS NIH HHS UL1 TR001070NCI NIH HHS P30 CA016058
6 · The paper itself

Abstract

The quantity and quality of collagen fibrils in the extracellular matrix (ECM) have a pivotal role in dictating biological processes. Several collagen-binding proteins (CBPs) are known to modulate collagen deposition and fibril diameter. However, limited studies exist on alterations in the fibril ultrastructure by CBPs. In this study, we elucidate how the collagen receptor, discoidin domain receptor 1 (DDR1) regulates the collagen content and ultrastructure in the adventitia of DDR1 knock-out (KO) mice. DDR1 KO mice exhibit increased collagen deposition as observed using Masson's trichrome. Collagen ultrastructure was evaluated in situ using transmission electron microscopy, scanning electron microscopy, and atomic force microscopy. Although the mean fibril diameter was not significantly different, DDR1 KO mice had a higher percentage of fibrils with larger diameter compared with their wild-type littermates. No significant differences were observed in the length of D-periods. In addition, collagen fibrils from DDR1 KO mice exhibited a small, but statistically significant, increase in the depth of the fibril D-periods. Consistent with these observations, a reduction in the depth of D-periods was observed in collagen fibrils reconstituted with recombinant DDR1-Fc. Our results elucidate how DDR1 modulates collagen fibril ultrastructure in vivo, which may have important consequences in the functional role(s) of the underlying ECM.

Indexed as

AnimalsCollagenDiscoidin Domain Receptor 1Extracellular MatrixMiceMice, KnockoutProtein BindingCollagenDiscoidin Domain Receptor 1aortaatomic force microscopycollagendiscoidin domain receptor 1electron microscopy

Identifiers

PMID27329311
PMCPMC5174982
OpenAlexW2474239689

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.