Evidence map›Paper›PMID 27329179›Full record

ArticleMicrobial cell factories2016

Fermentation of mixed substrates by Clostridium pasteurianum and its physiological, metabolic and proteomic characterizations.

Wael Sabra, Wei Wang, Sruthi Surandram, Christin Groeger, An-Ping Zeng

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Wael SabraInstitute of Bioprocess and Biosystems Engineering, Hamburg University of Technology, Denickestrasse 15, 21071, Hamburg, Germany.
Wei WangInstitute of Bioprocess and Biosystems Engineering, Hamburg University of Technology, Denickestrasse 15, 21071, Hamburg, Germany.
Sruthi SurandramInstitute of Bioprocess and Biosystems Engineering, Hamburg University of Technology, Denickestrasse 15, 21071, Hamburg, Germany.
Christin GroegerInstitute of Bioprocess and Biosystems Engineering, Hamburg University of Technology, Denickestrasse 15, 21071, Hamburg, Germany.
An-Ping ZengInstitute of Bioprocess and Biosystems Engineering, Hamburg University of Technology, Denickestrasse 15, 21071, Hamburg, Germany. aze@tuhh.de.
Hamburg University of Technology · DEUniversität Hamburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundClostridium pasteurianum is becoming increasingly attractive for the production of chemicals and fuels such as n-butanol and 1,3-propanediol. Previously we have shown that dual substrate fermentation using glucose and glycerol enhanced the cell growth and butanol production significantly. Although C. pasteurianum can grow efficiently with either glucose or glycerol alone, under certain conditions, glucose limitation in the mixed substrate fermentation leads to growth cessation. To understand this phenomenon and for process optimization, fermentation experiments were performed in the presence of excess glycerol but with varied initial concentrations of glucose which were followed by physiological, metabolic and proteomic analyses.

resultsPhysiological characterization showed that the observed cease of growth is not due to the toxicity of n-butanol. Furthermore, the growth can be resumed by addition of glucose or the intermediate oxaloacetate. Proteomic analysis shed more light on the system-level regulation of many proteins directly or indirectly associated with this phenomenon. Surprisingly, it is found that the specific growth rate of C. pasteurianum in the different growth phases (e.g. before and after glucose limitation) correlated well with the expression level of the ATP dependent pyruvate carboxylase and with the expression level of biotin synthase which provides the cofactor biotin for the formation of oxaloacetate from pyruvate. Bioenergetic analysis based on the formation rates of metabolites further show that ATP supply is not a limiting factor for the pyruvate carboxylation to oxaloacetate.

conclusionsThe results of physiological and proteomic analyses clearly show that the anaplerotic synthesis of oxaloacetate plays a key role in determining the growth behaviour of C. pasteurianum in fermentations with mixed substrates of glucose and glycerol. This study provides interesting targets for metabolic engineering of this emerging industrial microorganism.

Indexed as

1-ButanolBacterial ProteinsClostridiumFermentationGlucosePropylene GlycolsProteomics1,3-propanediol1-ButanolBacterial ProteinsGlucosePropylene Glycols1,3-propanediolButanolMixed substrate fermentationOxaloacetatePyruvate decarboxylation

Identifiers

PMID27329179
PMCPMC4916542
OpenAlexW2468868683

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.