Evidence map›Paper›PMID 27327263›Full record

ArticleJournal of acquired immune deficiency syndromes (1999)2016

HIV-1 Drug Resistance by Ultra-Deep Sequencing Following Short Course Zidovudine, Single-Dose Nevirapine, and Single-Dose Tenofovir with Emtricitabine for Prevention of Mother-to-Child Transmission.

Reshmi Samuel, Marc Noguera Julian, Roger Paredes, Raveen Parboosing, Pravi Moodley, Lavanya Singh, Anneta Naidoo, Michelle Gordon

Open access · hybridAbstract read
In one paragraph

Article in Journal of acquired immune deficiency syndromes (1999), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Drug resistance patterns in HIV patients with virologic failure in Iran.Archives of clinical infectious diseases · 2019
    Article
  3. Article
  4. What is new in perinatal HIV prevention?Current opinion in pediatrics · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Reshmi Samuel*Department of Virology, National Health Laboratory Service, University of KwaZulu-Natal, Durban, South Africa; †IrsiCaixa AIDS Research Institute, Badalona, Catalonia, Spain; ‡Universitat de Vic, Vic, Catalonia, Spain; §HIV Unit, Hospital Universitari Germans Trias i Pujol, Badalona, Catalonia, Spain; ∥Universitat Autonoma de Barcelona, Barcelona, Catalonia, Spain; and ¶Department of Virology, HIV Pathogenesis Laboratory, Nelson R Mandela Medical School, University of KwaZulu-Natal, Durban, South Africa.
Marc Noguera Julian
Roger Paredes
Raveen Parboosing
Pravi Moodley
Lavanya Singh
Anneta Naidoo
Michelle Gordon
University of KwaZulu-Natal · ZANational Health Laboratory Service · ZAHospital Universitari Germans Trias i Pujol · ESIrsiCaixa · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antiretroviral drug resistance following pMTCT strategies remains a significant problem. With rapid advancements in next generation sequencing technologies, there is more focus on HIV drug-resistant variants of low frequency, or the so-called minority variants. In South Africa, AZT monotherapy for pMTCT, similar to World Health Organization option A, has been used since 2008. In 2010, a single dose of co-formulated TDF/FTC was included in the strategy for prevention of resistance conferred by single-dose nevirapine (sd NVP). The study was conducted in KwaZulu-Natal, South Africa, among pMTCT participants who received AZT monotherapy from 14 weeks of gestation, intrapartum AZT and sd NVP, and postpartum sd TDF/FTC. Twenty-six specimens collected at 6 weeks post-delivery were successfully sequenced using 454 ultra-deep sequencing. Non-nucleoside reverse transcriptase inhibitor (NNRTI) resistance was detected in 17 of 26 (65%) patients, 2 (7%) had Thymidine analogue mutations, and 3 (11%) had K65R. Of the 17 patients with NNRTI resistance, 11 (65%) had high-level NNRTI resistance, whereas 6 (35%) had intermediate NNRTI resistance. The levels of NNRTI resistance are much higher than would be expected, given the inclusion of antepartum AZT and postpartum TDF/FTC. This high level of NNRTI resistance could impact future NNRTI-containing treatment for a large proportion of pMTCT-exposed women. The detection of Thymidine analogue mutations highlights the need to understand the clinical impact of these on AZT-containing antiretroviral treatment in women exposed to AZT monotherapy.

Indexed as

Drug Resistance, ViralAnti-HIV AgentsDrug Therapy, CombinationEmtricitabineFemaleHIV-1HIV InfectionsHumansInfant, NewbornInfectious Disease Transmission, VerticalMutationNevirapinePregnancyPregnancy Complications, InfectiousTenofovirViral LoadAnti-HIV AgentsEmtricitabineNevirapineTenofovirZidovudine

Identifiers

PMID27327263
PMCPMC5172515
OpenAlexW2543476281

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.