Evidence map›Paper›PMID 27326855›Full record

ReviewMicrobial drug resistance (Larchmont, N.Y.)2016

Orthologous and Paralogous AmpD Peptidoglycan Amidases from Gram-Negative Bacteria.

Ivanna Rivera, Rafael Molina, Mijoon Lee, Shahriar Mobashery, Juan A Hermoso

Open access · hybridAbstract readReview
In one paragraph

Review in Microbial drug resistance (Larchmont, N.Y.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 30 citations in OpenAlex.

  1. Mutations inMicrobiology spectrum · 2025
    Article
  2. Article
  3. Article
  4. Role of peptidoglycan recycling enzymes AmpD and AnmK inFrontiers in cellular and infection microbiology · 2022
    Article
  5. Article
  6. Constructing and deconstructing the bacterial cell wall.Protein science : a publication of the Protein Society · 2020
    Review
  7. Article
  8. Article
  9. Article
  10. Interplay between Peptidoglycan Biology and Virulence in Gram-Negative Pathogens.Microbiology and molecular biology reviews : MMBR · 2018
    Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ivanna Rivera1 Department of Crystallography and Structural Biology, Institute of Química-Física "Rocasolano," CSIC, Madrid, Spain .
Rafael Molina1 Department of Crystallography and Structural Biology, Institute of Química-Física "Rocasolano," CSIC, Madrid, Spain .
Mijoon Lee2 Department of Chemistry and Biochemistry, University of Notre Dame , Notre Dame, Indiana.
Shahriar Mobashery2 Department of Chemistry and Biochemistry, University of Notre Dame , Notre Dame, Indiana.
Juan A Hermoso1 Department of Crystallography and Structural Biology, Institute of Química-Física "Rocasolano," CSIC, Madrid, Spain .
University of Notre Dame · US

Funding

Penicillin-Binding Proteins, Mechanism and InhibitionR01GM061629 · NIGMS · WAYNE STATE UNIVERSITY · PI MOBASHERY, SHAHRIAR · 2001 to 2018
$5.1M
NIGMS NIH HHS R01 GM061629
6 · The paper itself

Abstract

Cell wall recycling and β-lactam antibiotic resistance are linked in Enterobacteriaceae and in Pseudomonas aeruginosa. This process involves a large number of murolytic enzymes, among them a cytoplasmic peptidoglycan amidase AmpD, which plays an essential role by cleaving the peptide stem from key intermediates en route to the β-lactamase production (a resistance mechanism) and cell wall recycling. Uniquely, P. aeruginosa has two additional paralogues of AmpD, designated AmpDh2 and AmpDh3, which are periplasmic enzymes. Despite the fact that AmpDh2 and AmpDh3 share a common motif for their respective catalytic domains, they are each comprised of multidomain architectures and exhibit distinct oligomerization properties. We review herein the structural and biochemical properties of orthologous and paralogous AmpD proteins and discuss their implication in cell wall recycling and antibiotic resistance processes.

Indexed as

Bacterial ProteinsCatalytic DomainCell WallDrug Resistance, MicrobialEnterobacteriaceaeGene ExpressionIsoenzymesMetalloproteasesModels, MolecularN-Acetylmuramoyl-L-alanine AmidasePeptidoglycanPeriplasmProtein MultimerizationProtein Structure, SecondaryPseudomonas aeruginosaStructural Homology, ProteinAmpDh2 protein, Pseudomonas aeruginosaAmpD protein, BacteriaBacterial ProteinsIsoenzymesMetalloproteasesN-Acetylmuramoyl-L-alanine AmidasePeptidoglycanVirulence Factors

Identifiers

PMID27326855
PMCPMC5036320
OpenAlexW2461296320

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.