Evidence map›Paper›PMID 27325663›Full record

ArticlePlant physiology2016

Evolution of Xylan Substitution Patterns in Gymnosperms and Angiosperms: Implications for Xylan Interaction with Cellulose.

Marta Busse-Wicher, An Li, Rodrigo L Silveira, Caroline S Pereira, Theodora Tryfona, Thiago C F Gomes, Munir S Skaf, Paul Dupree

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
32.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 178 citations in OpenAlex.

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  10. Review
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  14. Plant Cell Wall PolysaccharidePlants (Basel, Switzerland) · 2024
    Review
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  16. Review
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9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Marta Busse-WicherDepartment of Biochemistry and The Leverhulme Trust Centre for Natural Material Innovation, University of Cambridge, Cambridge CB2 1QW, United Kingdom (M.B.-W., A.L., T.T., P.D.); Institute of Chemistry, University of Campinas-UNICAMP, Campinas, SP 13084-862, Brazil (R.L.S, C.S.P., M.S.S.); andDepartment of Chemistry, Instituto Tecnológico de Aeronáutica, Praça Marechal Eduardo Gomes, SP 12228-900, Brazil (T.C.F.G.) mnb29@cam.ac.uk pd101@cam.ac.uk.ORCID 0000-0001-6290-2462
An LiDepartment of Biochemistry and The Leverhulme Trust Centre for Natural Material Innovation, University of Cambridge, Cambridge CB2 1QW, United Kingdom (M.B.-W., A.L., T.T., P.D.); Institute of Chemistry, University of Campinas-UNICAMP, Campinas, SP 13084-862, Brazil (R.L.S, C.S.P., M.S.S.); andDepartment of Chemistry, Instituto Tecnológico de Aeronáutica, Praça Marechal Eduardo Gomes, SP 12228-900, Brazil (T.C.F.G.).
Rodrigo L SilveiraDepartment of Biochemistry and The Leverhulme Trust Centre for Natural Material Innovation, University of Cambridge, Cambridge CB2 1QW, United Kingdom (M.B.-W., A.L., T.T., P.D.); Institute of Chemistry, University of Campinas-UNICAMP, Campinas, SP 13084-862, Brazil (R.L.S, C.S.P., M.S.S.); andDepartment of Chemistry, Instituto Tecnológico de Aeronáutica, Praça Marechal Eduardo Gomes, SP 12228-900, Brazil (T.C.F.G.).ORCID 0000-0001-9515-3082
Caroline S PereiraDepartment of Biochemistry and The Leverhulme Trust Centre for Natural Material Innovation, University of Cambridge, Cambridge CB2 1QW, United Kingdom (M.B.-W., A.L., T.T., P.D.); Institute of Chemistry, University of Campinas-UNICAMP, Campinas, SP 13084-862, Brazil (R.L.S, C.S.P., M.S.S.); andDepartment of Chemistry, Instituto Tecnológico de Aeronáutica, Praça Marechal Eduardo Gomes, SP 12228-900, Brazil (T.C.F.G.).ORCID 0000-0002-0248-0883
Theodora TryfonaDepartment of Biochemistry and The Leverhulme Trust Centre for Natural Material Innovation, University of Cambridge, Cambridge CB2 1QW, United Kingdom (M.B.-W., A.L., T.T., P.D.); Institute of Chemistry, University of Campinas-UNICAMP, Campinas, SP 13084-862, Brazil (R.L.S, C.S.P., M.S.S.); andDepartment of Chemistry, Instituto Tecnológico de Aeronáutica, Praça Marechal Eduardo Gomes, SP 12228-900, Brazil (T.C.F.G.).ORCID 0000-0002-1618-3521
Thiago C F GomesDepartment of Biochemistry and The Leverhulme Trust Centre for Natural Material Innovation, University of Cambridge, Cambridge CB2 1QW, United Kingdom (M.B.-W., A.L., T.T., P.D.); Institute of Chemistry, University of Campinas-UNICAMP, Campinas, SP 13084-862, Brazil (R.L.S, C.S.P., M.S.S.); andDepartment of Chemistry, Instituto Tecnológico de Aeronáutica, Praça Marechal Eduardo Gomes, SP 12228-900, Brazil (T.C.F.G.).
Munir S SkafDepartment of Biochemistry and The Leverhulme Trust Centre for Natural Material Innovation, University of Cambridge, Cambridge CB2 1QW, United Kingdom (M.B.-W., A.L., T.T., P.D.); Institute of Chemistry, University of Campinas-UNICAMP, Campinas, SP 13084-862, Brazil (R.L.S, C.S.P., M.S.S.); andDepartment of Chemistry, Instituto Tecnológico de Aeronáutica, Praça Marechal Eduardo Gomes, SP 12228-900, Brazil (T.C.F.G.).ORCID 0000-0001-7485-1228
Paul DupreeDepartment of Biochemistry and The Leverhulme Trust Centre for Natural Material Innovation, University of Cambridge, Cambridge CB2 1QW, United Kingdom (M.B.-W., A.L., T.T., P.D.); Institute of Chemistry, University of Campinas-UNICAMP, Campinas, SP 13084-862, Brazil (R.L.S, C.S.P., M.S.S.); andDepartment of Chemistry, Instituto Tecnológico de Aeronáutica, Praça Marechal Eduardo Gomes, SP 12228-900, Brazil (T.C.F.G.) mnb29@cam.ac.uk pd101@cam.ac.uk.ORCID 0000-0001-9270-6286
Instituto Tecnológico de Aeronáutica · BRUniversity of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research Council BB/G016240/1
6 · The paper itself

Abstract

The interaction between cellulose and xylan is important for the load-bearing secondary cell wall of flowering plants. Based on the precise, evenly spaced pattern of acetyl and glucuronosyl (MeGlcA) xylan substitutions in eudicots, we recently proposed that an unsubstituted face of xylan in a 2-fold helical screw can hydrogen bond to the hydrophilic surfaces of cellulose microfibrils. In gymnosperm cell walls, any role for xylan is unclear, and glucomannan is thought to be the important cellulose-binding polysaccharide. Here, we analyzed xylan from the secondary cell walls of the four gymnosperm lineages (Conifer, Gingko, Cycad, and Gnetophyta). Conifer, Gingko, and Cycad xylan lacks acetylation but is modified by arabinose and MeGlcA. Interestingly, the arabinosyl substitutions are located two xylosyl residues from MeGlcA, which is itself placed precisely on every sixth xylosyl residue. Notably, the Gnetophyta xylan is more akin to early-branching angiosperms and eudicot xylan, lacking arabinose but possessing acetylation on alternate xylosyl residues. All these precise substitution patterns are compatible with gymnosperm xylan binding to hydrophilic surfaces of cellulose. Molecular dynamics simulations support the stable binding of 2-fold screw conifer xylan to the hydrophilic face of cellulose microfibrils. Moreover, the binding of multiple xylan chains to adjacent planes of the cellulose fibril stabilizes the interaction further. Our results show that the type of xylan substitution varies, but an even pattern of xylan substitution is maintained among vascular plants. This suggests that 2-fold screw xylan binds hydrophilic faces of cellulose in eudicots, early-branching angiosperm, and gymnosperm cell walls.

Indexed as

AcetylationBiological EvolutionCelluloseCell WallComputer SimulationCycadopsidaMagnoliopsidaModels, MolecularMolecular Dynamics SimulationXylansCelluloseXylans

Identifiers

PMID27325663
PMCPMC4972281
OpenAlexW2460140337

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.