Evidence map›Paper›PMID 27325639›Full record

ArticleThe Plant cell2016

Moss Chloroplasts Are Surrounded by a Peptidoglycan Wall Containing D-Amino Acids.

Takayuki Hirano, Koji Tanidokoro, Yasuhiro Shimizu, Yutaka Kawarabayasi, Toshihisa Ohshima, Momo Sato, Shinji Tadano, Hayato Ishikawa, Susumu Takio, Katsuaki Takechi and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 85 citations in OpenAlex.

  1. Article
  2. Article
  3. D-amino acid aminotransferase1 regulates grain chalkiness in rice by modulating endoplasmic reticulum stress response.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  6. Review
  7. Mammalian Tolerance to Amino Acid Heterochirality.Chembiochem : a European journal of chemical biology · 2025
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Takayuki HiranoGraduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan.
Koji TanidokoroGraduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan.
Yasuhiro ShimizuFaculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan.
Yutaka KawarabayasiFaculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki 305-8566, Japan.
Toshihisa OhshimaFaculty of Engineering, Osaka Institute of Technology, Asahi-ku, Osaka 535-8585, Japan.
Momo SatoGraduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan.
Shinji TadanoGraduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan.
Hayato IshikawaGraduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan.
Susumu TakioGraduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan Center for Marine Environment Studies, Kumamoto University, Kumamoto 860-8555, Japan.
Katsuaki TakechiGraduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan.
Hiroyoshi TakanoGraduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan Institute of Pulsed Power Science, Kumamoto University, Kumamoto 860-8555, Japan takano@kumamoto-u.ac.jp.
Kumamoto University · JPKyushu University · JPNational Institute of Advanced Industrial Science and Technology · JPOsaka Institute of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is believed that the plastids in green plants lost peptidoglycan (i.e., a bacterial cell wall-containing d-amino acids) during their evolution from an endosymbiotic cyanobacterium. Although wall-like structures could not be detected in the plastids of green plants, the moss Physcomitrella patens has the genes required to generate peptidoglycan (Mur genes), and knocking out these genes causes defects in chloroplast division. Here, we generated P patens knockout lines (∆Pp-ddl) for a homolog of the bacterial peptidoglycan-synthetic gene encoding d-Ala:d-Ala ligase. ∆Pp-ddl had a macrochloroplast phenotype, similar to other Mur knockout lines. The addition of d-Ala-d-Ala (DA-DA) to the medium suppressed the appearance of giant chloroplasts in ∆Pp-ddl, but the addition of l-Ala-l-Ala (LA-LA), DA-LA, LA-DA, or d-Ala did not. Recently, a metabolic method for labeling bacterial peptidoglycan was established using ethynyl-DA-DA (EDA-DA) and click chemistry to attach an azide-modified fluorophore to the ethynyl group. The ∆Pp-ddl line complemented with EDA-DA showed that moss chloroplasts are completely surrounded by peptidoglycan. Our findings strongly suggest that the moss plastids have a peptidoglycan wall containing d-amino acids. By contrast, no plastid phenotypes were observed in the T-DNA tagged ddl mutant lines of Arabidopsis thaliana.

Indexed as

Amino AcidsArabidopsisBryopsidaChloroplastsClick ChemistryDNA, BacterialPeptidoglycanPlant ProteinsPlants, Genetically ModifiedPlastidsAmino AcidsDNA, BacterialPeptidoglycanPlant ProteinsT-DNA

Identifiers

PMID27325639
PMCPMC4981129
OpenAlexW2464817468

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.