Evidence map›Paper›PMID 27324634›Full record

ArticleJournal of molecular modeling2016

Structure-based virtual screening of hypothetical inhibitors of the enzyme longiborneol synthase-a potential target to reduce Fusarium head blight disease.

E Bresso, V Leroux, M Urban, K E Hammond-Kosack, B Maigret, N F Martins

Open access · hybridAbstract read
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In one paragraph

Article in Journal of molecular modeling, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
1.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 6 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 4 countries.

E BressoEMBRAPA Genetic Resources and Biotechnology Parque Estação Biológica - PqEB, Av. W5 Norte, Brasília, DF, Brazil.
V LerouxCNRS, LORIA, Campus Scientifique, BP 239, 54506, Vandœuvre-lès-Nancy, France.
M UrbanDepartment of Plant Biology and Crop Science, Rothamsted Research, Harpenden, Hertfordshire, AL5 2JQ, UK.
K E Hammond-KosackDepartment of Plant Biology and Crop Science, Rothamsted Research, Harpenden, Hertfordshire, AL5 2JQ, UK.
B MaigretCNRS, LORIA, Campus Scientifique, BP 239, 54506, Vandœuvre-lès-Nancy, France.
N F MartinsEMBRAPA Genetic Resources and Biotechnology Parque Estação Biológica - PqEB, Av. W5 Norte, Brasília, DF, Brazil. natalia.martins@embrapa.br.
Brazilian Agricultural Research Corporation · BRRothamsted Research · GBComputer Algorithms for Medicine · ATLaboratoire Lorrain de Recherche en Informatique et ses Applications · FR

Funding

Biotechnology and Biological Sciences Research Council BB/I000488/1
6 · The paper itself

Abstract

Fusarium head blight (FHB) is one of the most destructive diseases of wheat and other cereals worldwide. During infection, the Fusarium fungi produce mycotoxins that represent a high risk to human and animal health. Developing small-molecule inhibitors to specifically reduce mycotoxin levels would be highly beneficial since current treatments unspecifically target the Fusarium pathogen. Culmorin possesses a well-known important synergistically virulence role among mycotoxins, and longiborneol synthase appears to be a key enzyme for its synthesis, thus making longiborneol synthase a particularly interesting target. This study aims to discover potent and less toxic agrochemicals against FHB. These compounds would hamper culmorin synthesis by inhibiting longiborneol synthase. In order to select starting molecules for further investigation, we have conducted a structure-based virtual screening investigation. A longiborneol synthase structural model is first built using homology modeling, followed by molecular dynamics simulations that provided the required input for a protein-ligand ensemble docking procedure. From this strategy, the three most interesting compounds (hits) were selected among the 25 top-ranked docked compounds from a library of 15,000 drug-like compounds. These putative inhibitors of longiborneol synthase provide a sound starting point for further studies involving molecular modeling coupled to biochemical experiments. This process could eventually lead to the development of novel approaches to reduce mycotoxin contamination in harvested grain.

Indexed as

AgrochemicalsAmino Acid SequenceEnzyme InhibitorsFungal ProteinsFusariumHigh-Throughput Screening AssaysLigasesModels, MolecularMolecular StructurePhylogenyPlant DiseasesProtein BindingProtein DomainsSequence Homology, Amino AcidSesquiterpenesAgrochemicalsculmorinEnzyme InhibitorsFungal ProteinsLigaseslongiborneolSesquiterpenesCulmorinEnsemble dockingFusarium mycotoxinsHomology modelingInhibitorsMolecular dynamics

Identifiers

PMID27324634
OpenAlexW2467968198

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.