Evidence map›Paper›PMID 27323394›Full record

ArticleOncotarget2016

Mutation spectrum of TP53 gene predicts clinicopathological features and survival of gastric cancer.

Tomomitsu Tahara, Tomoyuki Shibata, Yasuyuki Okamoto, Jumpei Yamazaki, Tomohiko Kawamura, Noriyuki Horiguchi, Masaaki Okubo, Naoko Nakano, Takamitsu Ishizuka, Mitsuo Nagasaka and 2 more

Abstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Circulating Antibodies against Epstein-Barr Virus (EBV) and p53 in EBV-Positive and -Negative Gastric Cancer.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2020
    Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. The spectrum of TP53 mutations in Rwandan patients with gastric cancer.Genes and environment : the official journal of the Japanese Environmental Mutagen Society · 2024
    Article
  8. Article
  9. Mutational separation and clinical outcomes ofWorld journal of gastrointestinal surgery · 2023
    Article
  10. Review
  11. Article
  12. An exploration of gastric cancer with heterogeneous mismatch repair status.Virchows Archiv : an international journal of pathology · 2023
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Different effects of p53 protein overexpression on the survival of gastric cancer patients according to Lauren histologic classification: a retrospective study.Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2021
    Article
  20. Wild-Type TP53 Predicts Poor Prognosis in Patients with Gastric Cancer.Journal of cancer science and clinical therapeutics · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Tomomitsu TaharaDepartment of Gastroenterology, Fujita Health University School of Medicine, Toyoake, Japan.
Tomoyuki ShibataDepartment of Gastroenterology, Fujita Health University School of Medicine, Toyoake, Japan.
Yasuyuki OkamotoDepartment of Gastroenterology and Metabolism, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan.
Jumpei YamazakiLaboratory of Molecular Medicine, Hokkaido University Graduate School of Veterinary Medicine, Sapporo, Japan.
Tomohiko KawamuraDepartment of Gastroenterology, Fujita Health University School of Medicine, Toyoake, Japan.
Noriyuki HoriguchiDepartment of Gastroenterology, Fujita Health University School of Medicine, Toyoake, Japan.
Masaaki OkuboDepartment of Gastroenterology, Fujita Health University School of Medicine, Toyoake, Japan.
Naoko NakanoDepartment of Gastroenterology, Fujita Health University School of Medicine, Toyoake, Japan.
Takamitsu IshizukaDepartment of Gastroenterology, Fujita Health University School of Medicine, Toyoake, Japan.
Mitsuo NagasakaDepartment of Gastroenterology, Fujita Health University School of Medicine, Toyoake, Japan.
Yoshihito NakagawaDepartment of Gastroenterology, Fujita Health University School of Medicine, Toyoake, Japan.
Naoki OhmiyaDepartment of Gastroenterology, Fujita Health University School of Medicine, Toyoake, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimTP53 gene is frequently mutated in gastric cancer (GC), but the relationship with clinicopathological features and prognosis is conflicting. Here, we screened TP53 mutation spectrum of 214 GC patients in relation to their clinicopathological features and prognosis.

resultsTP53 nonsilent mutations were detected in 80 cases (37.4%), being frequently occurred as C:G to T:A single nucleotide transitions at 5'-CpG-3' sites. TP53 mutations occurred more frequently in differentiated histologic type than in undifferentiated type in the early stage (48.6% vs. 7%, P=0.0006), while the mutations correlated with venous invasion among advanced stage (47.7% vs. 20.7%, P=0.04). Subset of GC with TP53 hot spot mutations (R175, G245, R248, R273, R282) presented significantly worse overall survival and recurrence free survival compared to others (both P=0.001).

methodsMatched biopsies from GC and adjacent tissues from 214 patients were used for the experiment. All coding regions of TP53 gene (exon2 to exon11) were examined using Sanger sequencing.

conclusionOur data suggest that GC with TP53 mutations seems to develop as differentiated histologic type and show aggressive biological behavior such as venous invasion. Moreover, our data emphasizes the importance of discriminating TP53 hot spot mutations (R175, G245, R248, R273, R282) to predict worse overall survival and recurrence free survival of GC patients.

Indexed as

DNA Mutational AnalysisAdultAgedAged, 80 and overBiopsyCell DifferentiationCpG IslandsDisease-Free SurvivalExonsFemaleHelicobacter pyloriHumansMaleMiddle AgedMutationPrognosisTP53 protein, humanTumor Suppressor Protein p53gastric cancerhotspot mutationsspectrumsurvivalTP53 mutation

Identifiers

PMID27323394
PMCPMC5173132

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.