Evidence map›Paper›PMID 27322419›Full record

ArticleNature neuroscience2016

The mouse cortico-striatal projectome.

Houri Hintiryan, Nicholas N Foster, Ian Bowman, Maxwell Bay, Monica Y Song, Lin Gou, Seita Yamashita, Michael S Bienkowski, Brian Zingg, Muye Zhu and 4 more

Abstract read
In one paragraph

Article in Nature neuroscience, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 341 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
341citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

341 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Optogenetic fMRI for Brain-Wide Circuit Analysis of Sensory Processing.International journal of molecular sciences · 2022
    Pooled it
  3. Article
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  7. Calbindin stratifies midbrain dopaminergic neurons governing distinct aspects of locomotion.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  14. Lower Striatal and Cortical Calretinin Interneuron Density Associated With Altered Social Behavior in Cntnap2 Knockout Mice.Autism research : official journal of the International Society for Autism Research · 2026
    Article
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281 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Houri HintiryanUSC Stevens Neuroimaging and Informatics Institute, Laboratory of Neuro Imaging (LONI), Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
Nicholas N FosterUSC Stevens Neuroimaging and Informatics Institute, Laboratory of Neuro Imaging (LONI), Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
Ian BowmanUSC Stevens Neuroimaging and Informatics Institute, Laboratory of Neuro Imaging (LONI), Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
Maxwell BayUSC Stevens Neuroimaging and Informatics Institute, Laboratory of Neuro Imaging (LONI), Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
Monica Y SongUSC Stevens Neuroimaging and Informatics Institute, Laboratory of Neuro Imaging (LONI), Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
Lin GouUSC Stevens Neuroimaging and Informatics Institute, Laboratory of Neuro Imaging (LONI), Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
Seita YamashitaUSC Stevens Neuroimaging and Informatics Institute, Laboratory of Neuro Imaging (LONI), Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
Michael S BienkowskiUSC Stevens Neuroimaging and Informatics Institute, Laboratory of Neuro Imaging (LONI), Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
Brian ZinggZilkha Neurogenetic Institute, Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
Muye ZhuUSC Stevens Neuroimaging and Informatics Institute, Laboratory of Neuro Imaging (LONI), Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
X William YangCenter for Neurobehavioral Genetics, Semel Institute for Neuroscience &Human Behavior, David Geffen School of Medicine at University of California, Los Angeles, Los Angeles, California, USA.
Jean C ShihDepartment of Pharmacology and Pharmaceutical Sciences, School of Pharmacy, University of Southern California, Los Angeles, California, USA.
Arthur W TogaUSC Stevens Neuroimaging and Informatics Institute, Laboratory of Neuro Imaging (LONI), Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
Hong-Wei DongUSC Stevens Neuroimaging and Informatics Institute, Laboratory of Neuro Imaging (LONI), Keck School of Medicine of University of Southern California, Los Angeles, California, USA.

Funding

TR&D3: Intrinsic Surface MappingP41EB015922 · NIBIB · UNIVERSITY OF SOUTHERN CALIFORNIA · PI THOMPSON, PAUL M · 2012 to 2022
$14.1M
The Mouse Connectome Project Phase III: Assembling the global neural networks of the mouse brainR01MH094360 · NIMH · UNIVERSITY OF SOUTHERN CALIFORNIA · PI DONG, HONG-WEI · 2012 to 2021
$7.4M
Novel Genetic Strategy for Sparse Labeling and Manipulation of Mammalian NeuronsU01MH106008 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI YANG, XIANGDONG WILLIAM · 2014 to 2016
$2.0M
From Terabytes of Pixels to Intuitive Brain Networks (Administrative Supplement)U01CA198932 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI DONG, HONG-WEI · 2015 to 2017
$1.7M
Structural and Functional Neural Network Mediating Fear Memory and PTSDF32MH107071 · NIMH · UNIVERSITY OF SOUTHERN CALIFORNIA · PI BIENKOWSKI, MICHAEL · 2015 to 2016
$112k
NCI NIH HHS U01 CA198932NIBIB NIH HHS P41 EB015922NIMH NIH HHS F32 MH107071NIMH NIH HHS R01 MH094360NIMH NIH HHS U01 MH106008
6 · The paper itself

Abstract

Different cortical areas are organized into distinct intracortical subnetworks. The manner in which descending pathways from the entire cortex interact subcortically as a network remains unclear. We developed an open-access comprehensive mesoscale mouse cortico-striatal projectome: a detailed connectivity projection map from the entire cerebral cortex to the dorsal striatum or caudoputamen (CP) in rodents. On the basis of these projections, we used new computational neuroanatomical tools to identify 29 distinct functional striatal domains. Furthermore, we characterized different cortico-striatal networks and how they reconfigure across the rostral-caudal extent of the CP. The workflow was also applied to select cortico-striatal connections in two different mouse models of disconnection syndromes to demonstrate its utility for characterizing circuitry-specific connectopathies. Together, our results provide the structural basis for studying the functional diversity of the dorsal striatum and disruptions of cortico-basal ganglia networks across a broad range of disorders.

Indexed as

AnimalsBasal GangliaCerebral CortexMaleMice, Inbred C57BLModels, AnimalNeural Pathways

Identifiers

PMID27322419
PMCPMC5564682

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.