Evidence map›Paper›PMID 27320915›Full record

ArticleCell reports2016

A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification.

Scott A Rankin, Lu Han, Kyle W McCracken, Alan P Kenny, Christopher T Anglin, Emily A Grigg, Calyn M Crawford, James M Wells, John M Shannon, Aaron M Zorn

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
10.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 129 citations in OpenAlex.

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  15. Primary cilia are critical for tracheoesophageal septation.Developmental dynamics : an official publication of the American Association of Anatomists · 2024
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15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Scott A RankinDivision of Developmental Biology, Department of Pediatrics, Perinatal Institute and Cincinnati Children's Hospital, College of Medicine, University of Cincinnati, Cincinnati, OH 45229, USA.
Lu HanDivision of Developmental Biology, Department of Pediatrics, Perinatal Institute and Cincinnati Children's Hospital, College of Medicine, University of Cincinnati, Cincinnati, OH 45229, USA.
Kyle W McCrackenDivision of Developmental Biology, Department of Pediatrics, Perinatal Institute and Cincinnati Children's Hospital, College of Medicine, University of Cincinnati, Cincinnati, OH 45229, USA.
Alan P KennyDivision of Neonatology, Department of Pediatrics, Perinatal Institute and Cincinnati Children's Hospital, College of Medicine, University of Cincinnati, Cincinnati, OH 45229, USA.
Christopher T AnglinDivision of Developmental Biology, Department of Pediatrics, Perinatal Institute and Cincinnati Children's Hospital, College of Medicine, University of Cincinnati, Cincinnati, OH 45229, USA.
Emily A GriggDivision of Developmental Biology, Department of Pediatrics, Perinatal Institute and Cincinnati Children's Hospital, College of Medicine, University of Cincinnati, Cincinnati, OH 45229, USA.
Calyn M CrawfordDivision of Developmental Biology, Department of Pediatrics, Perinatal Institute and Cincinnati Children's Hospital, College of Medicine, University of Cincinnati, Cincinnati, OH 45229, USA.
James M WellsDivision of Developmental Biology, Department of Pediatrics, Perinatal Institute and Cincinnati Children's Hospital, College of Medicine, University of Cincinnati, Cincinnati, OH 45229, USA.
John M ShannonDivision of Pulmonary Biology, Department of Pediatrics, Perinatal Institute and Cincinnati Children's Hospital, College of Medicine, University of Cincinnati, Cincinnati, OH 45229, USA.
Aaron M ZornDivision of Developmental Biology, Department of Pediatrics, Perinatal Institute and Cincinnati Children's Hospital, College of Medicine, University of Cincinnati, Cincinnati, OH 45229, USA. Electronic address: aaron.zorn@cchmc.org.
Cincinnati Children's Hospital Medical Center · USUniversity of Cincinnati · US

Funding

Organoids as a Model System for Studying Gastrointestinal DiseaseU19AI116491 · NIAID · UNIVERSITY OF CINCINNATI · PI MOORE, SEAN RYAN · 2015 to 2019
$4.6M
Molecular Basis of Liver Development.R01DK070858 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI ZORN, AARON M · 2007 to 2017
$2.9M
Human Endocrine Cell DevelopmentR01DK092456 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI WELLS, JAMES M · 2012 to 2016
$2.3M
Osr transcription factors regulate embryonic lung developmentR01HL114898 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI ZORN, AARON M · 2012 to 2016
$2.1M
NHLBI NIH HHS R01 HL114898NIAID NIH HHS U19 AI116491NIDDK NIH HHS R01 DK070858NIDDK NIH HHS R01 DK092456
6 · The paper itself

Abstract

Organogenesis of the trachea and lungs requires a complex series of mesoderm-endoderm interactions mediated by WNT, BMP, retinoic acid (RA), and hedgehog (Hh), but how these pathways interact in a gene regulatory network is less clear. Using Xenopus embryology, mouse genetics, and human ES cell cultures, we identified a conserved signaling cascade that initiates respiratory lineage specification. We show that RA has multiple roles; first RA pre-patterns the lateral plate mesoderm and then it promotes Hh ligand expression in the foregut endoderm. Hh subsequently signals back to the pre-patterned mesoderm to promote expression of the lung-inducing ligands Wnt2/2b and Bmp4. Finally, RA regulates the competence of the endoderm to activate the Nkx2-1+ respiratory program in response to these mesodermal WNT and BMP signals. These data provide insights into early lung development and a paradigm for how mesenchymal signals are coordinated with epithelial competence during organogenesis.

Indexed as

Body PatterningSignal TransductionAnimalsCell DifferentiationCells, CulturedEmbryo, MammalianEmbryo, NonmammalianEndodermHedgehog ProteinsHuman Embryonic Stem CellsHumansIntestinesLigandsLungMesodermMiceHedgehog ProteinsLigandsTretinoinWnt ProteinsXenopus ProteinsBmpHedgehoglung developmentNkx2-1organogenesisretinoic acidWntXenopus

Identifiers

PMID27320915
PMCPMC5314425
OpenAlexW2420197495

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.