Evidence map›Paper›PMID 27320910›Full record

ArticleCell reports2016

The TIP60 Complex Is a Conserved Coactivator of HIF1A.

Joel I Perez-Perri, Veronica L Dengler, K Audrey Audetat, Ahwan Pandey, Elizabeth A Bonner, Marjeta Urh, Jacqui Mendez, Danette L Daniels, Pablo Wappner, Matthew D Galbraith and 1 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 97 citations in OpenAlex.

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  16. Review
  17. ABL kinases regulate the stabilization of HIF-1α and MYC through CPSF1.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  18. Epigenetic Regulation Mediated by Sphingolipids in Cancer.International journal of molecular sciences · 2023
    Review
  19. Review
  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Joel I Perez-PerriInstituto Leloir, 1405 Buenos Aires, Argentina.
Veronica L DenglerHoward Hughes Medical Institute and Department of Molecular, Cellular and Developmental Biology, University of Colorado Boulder, Boulder, CO 80309, USA.
K Audrey AudetatHoward Hughes Medical Institute and Department of Molecular, Cellular and Developmental Biology, University of Colorado Boulder, Boulder, CO 80309, USA.
Ahwan PandeyDepartment of Pharmacology, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, USA; Howard Hughes Medical Institute and Department of Molecular, Cellular and Developmental Biology, University of Colorado Boulder, Boulder, CO 80309, USA.
Elizabeth A BonnerDepartment of Pharmacology, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, USA.
Marjeta UrhPromega Corporation, Madison, WI 53711, USA.
Jacqui MendezPromega Corporation, Madison, WI 53711, USA.
Danette L DanielsPromega Corporation, Madison, WI 53711, USA.
Pablo WappnerInstituto Leloir, 1405 Buenos Aires, Argentina.
Matthew D GalbraithDepartment of Pharmacology, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, USA; Howard Hughes Medical Institute and Department of Molecular, Cellular and Developmental Biology, University of Colorado Boulder, Boulder, CO 80309, USA. Electronic address: matthew.galbraith@ucdenver.edu.
Joaquín M EspinosaLinda Crnic Institute for Down Syndrome, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, USA; Department of Pharmacology, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, USA; Howard Hughes Medical Institute and Department of Molecular, Cellular and Developmental Biology, University of Colorado Boulder, Boulder, CO 80309, USA. Electronic address: joaquin.espinosa@ucdenver.edu.
Promega (United States) · USUniversity of Colorado Anschutz Medical Campus · USFundación Instituto Leloir · ARUniversity of Colorado Boulder · USHoward Hughes Medical Institute · US

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Colorado Clinical and Translational Sciences InstituteUL1TR001082 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2013 to 2017
$48.0M
PILOT STUDY--SUBSTRATE METABOLISM IN EXTREMELY LOW BIRTH WEIGHT INFANTSP30DK048520 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI Wendy M Kohrt · 1995 to 2026
$32.6M
TRAINING IN SIGNAL TRANSDUCTION &CELL CYCLE REGULATIONT32GM008759 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI AHN, NATALIE G. · 2000 to 2020
$5.9M
Stress- and Promoter-Specific Mechanisms of Transcritpional Activation by p53R01CA117907 · NCI · UNIVERSITY OF COLORADO DENVER · PI ESPINOSA, JOAQUIN M. · 2006 to 2022
$4.4M
NCATS NIH HHS UL1 TR001082NCI NIH HHS P30 CA046934NCI NIH HHS R01 CA117907NIGMS NIH HHS T32 GM008759
6 · The paper itself

Abstract

Hypoxia-inducible factors (HIFs) are critical regulators of the cellular response to hypoxia. Despite their established roles in normal physiology and numerous pathologies, the molecular mechanisms by which they control gene expression remain poorly understood. We report here a conserved role for the TIP60 complex as a HIF1 transcriptional cofactor in Drosophila and human cells. TIP60 (KAT5) is required for HIF1-dependent gene expression in fly cells and embryos and colorectal cancer cells. HIF1A interacts with and recruits TIP60 to chromatin. TIP60 is dispensable for HIF1A association with its target genes but is required for HIF1A-dependent chromatin modification and RNA polymerase II activation in hypoxia. In human cells, global analysis of HIF1A-dependent gene activity reveals that most HIF1A targets require either TIP60, the CDK8-Mediator complex, or both as coactivators for full expression in hypoxia. Thus, HIF1A employs functionally diverse cofactors to regulate different subsets of genes within its transcriptional program.

Indexed as

Conserved SequenceAcetylationAnimalsChromatinCyclin-Dependent Kinase 8DNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsHCT116 CellsHEK293 CellsHistone AcetyltransferasesHistonesHumansHypoxia-Inducible Factor 1, alpha SubunitLysine Acetyltransferase 5Protein BindingCDK8 protein, humanChromatinCyclin-Dependent Kinase 8DNA-Binding ProteinsDrosophila ProteinsHistone AcetyltransferasesHistonesHypoxia-Inducible Factor 1, alpha SubunitKAT5 protein, humanLysine Acetyltransferase 5Protein SubunitsRNA Polymerase IISima protein, DrosophilaTip60 protein, Drosophila

Identifiers

PMID27320910
PMCPMC4957981
OpenAlexW2431898039

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.