Evidence map›Paper›PMID 27318698›Full record

ArticleDigestive diseases and sciences2016

Helicobacter pylori Strains from Duodenal Ulcer Patients Exhibit Mixed babA/B Genotypes with Low Levels of BabA Adhesin and Lewis b Binding.

Samaneh Saberi, Alexej Schmidt, Sana Eybpoosh, Maryam Esmaili, Yeganeh Talebkhan, Nazanin Mohajerani, Akbar Oghalaie, Mahmoud Eshagh Hosseini, Mohammad Ali Mohagheghi, Jeanna Bugaytova and 2 more

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Article in Digestive diseases and sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Pathogens (Basel, Switzerland) · 2024
    Review
  3. Article
  4. Toxins · 2021
    Review
  5. Cells · 2020
    Review
  6. Review
  7. World journal of gastroenterology · 2017
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Samaneh SaberiHPGC Group, Department of Medical Biotechnology, Biotechnology Research Center, Pasteur Institute of Iran, Tehran, 1316943551, Iran.
Alexej SchmidtDepartment of Medical Biosciences and Pathology, Umeå University, 901 85, Umeå, Sweden.
Sana EybpooshResearch Center for Modeling in Health, Institute for Future Studies in Health, Kerman University of Medical Sciences, Kerman, 7618747653, Iran.
Maryam EsmailiHPGC Group, Department of Medical Biotechnology, Biotechnology Research Center, Pasteur Institute of Iran, Tehran, 1316943551, Iran.
Yeganeh TalebkhanHPGC Group, Department of Medical Biotechnology, Biotechnology Research Center, Pasteur Institute of Iran, Tehran, 1316943551, Iran.
Nazanin MohajeraniHPGC Group, Department of Medical Biotechnology, Biotechnology Research Center, Pasteur Institute of Iran, Tehran, 1316943551, Iran.
Akbar OghalaieHPGC Group, Department of Medical Biotechnology, Biotechnology Research Center, Pasteur Institute of Iran, Tehran, 1316943551, Iran.
Mahmoud Eshagh HosseiniDepartment of Gastroenterology, Amiralam Hospital, Tehran University of Medical Sciences, Tehran, 1145765111, Iran.
Mohammad Ali MohagheghiCancer Research Center, Tehran University of Medical Sciences, Tehran, 141979733141, Iran.
Jeanna BugaytovaDepartment of Medical Biochemistry and Biophysics, Umeå University, 901 87, Umeå, Sweden.
Thomas BorénDepartment of Medical Biochemistry and Biophysics, Umeå University, 901 87, Umeå, Sweden. thomas.boren@umu.se.
Marjan MohammadiHPGC Group, Department of Medical Biotechnology, Biotechnology Research Center, Pasteur Institute of Iran, Tehran, 1316943551, Iran. marjan.mohammadi@pasteur.ac.ir.
Pasteur Institute of Iran · IRUmeå University · SEBiotechnology Research Center · IRTehran University of Medical Sciences · IRKerman University of Medical Sciences · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBabA is a Helicobacter pylori cell surface adhesin, which binds to the ABO/Le(b) histo-blood group antigens (Le(b)) and serves as a virulence factor.

methodsH. pylori single colonies were isolated from 156 [non-ulcer dyspepsia (NUD) = 97, duodenal ulcer (DU) = 34, gastric cancer (GC) = 25)] patients. babA and babB genes were evaluated by gene/locus-specific PCR. BabA protein expression and Le(b) binding activity were determined by immunoblotting and ELISA, respectively.

resultsThe combined categorization of H. pylori strains based on high, low or no levels of BabA expression and Le(b) binding, produced 4 groups: (I) BabA-high/Le(b)-high (36 %), (II) BabA-low/Le(b)-low (26 %), (III) BabA-neg/Le(b)-low (30 %) and (IV) BabA-neg/Le(b)-neg (8 %) strains. The majority (63 %) of the BabA-low/Le(b)-low strains exhibited mixed babA/B genotypes as compared to merely 18 % of the BabA-high/Le(b)-high, 15 % of the BabA-neg/Le(b)-neg and 11 % of the BabA-neg/Le(b)-low (P = 0.0001) strains. In contrast to NUD strains, the great majority (70 %) of DU strains were BabA-low/Le(b)-low (11 %, P = 0.0001), which compared to NUD strains, enhanced the risk of DU by 18.8-fold. In parallel, infection with babA/B mixed genotype strains amplified the risk of DU by 3.6-fold (vs. babA-positive: P = 0.01) to 6.9-fold (vs. babA-negative: P = 0.007).

conclusionsHere, we show higher prevalence of mixed babA/B genotypes among BabA-low/Le(b)-low clinical strains. Recombination of babA and babB genes across their loci may yield lower BabA expression and lower Le(b) binding activity. We conclude that H. pylori strains with lower Le(b) binding activity are better adapted for colonization of the gastric metaplastic patches in the duodenum and enhance the risk of duodenal ulcers.

Indexed as

Adhesins, BacterialAdultAgedBacterial Outer Membrane ProteinsDuodenal UlcerDyspepsiaFemaleGenotypeHelicobacter InfectionsHelicobacter pyloriHumansLewis Blood Group AntigensMaleMiddle AgedOligosaccharidesPolymerase Chain ReactionAdhesins, BacterialBabA protein, Helicobacter pyloriBabB protein, Helicobacter pyloriBacterial Outer Membrane ProteinsLewis Blood Group AntigensOligosaccharidesAdhesinBabADuodenal ulcerHelicobacter pyloriMixed babA/B genotypes

Identifiers

PMID27318698
OpenAlexW2442277020

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.