Evidence map›Paper›PMID 27318592›Full record

ArticleMedical image analysis2017

Computing group cardinality constraint solutions for logistic regression problems.

Yong Zhang, Dongjin Kwon, Kilian M Pohl

Abstract read
In one paragraph

Article in Medical image analysis, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Logistic Regression Confined by Cardinality-Constrained Sample and Feature Selection.IEEE transactions on pattern analysis and machine intelligence · 2020
    Article
  4. Article
  5. Article
  6. Joint Data Harmonization and Group Cardinality Constrained Classification.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Yong ZhangDepartment of Psychiatry & Behavioral Sciences, Stanford University, Palo Alto, CA 94304, USA. Electronic address: michaelzhang917@gmail.com.
Dongjin KwonDepartment of Psychiatry & Behavioral Sciences, Stanford University, Palo Alto, CA 94304, USA; Center for Health Sciences, SRI International, Menlo Park, CA 94025, USA.
Kilian M PohlDepartment of Psychiatry & Behavioral Sciences, Stanford University, Palo Alto, CA 94304, USA; Center for Health Sciences, SRI International, Menlo Park, CA 94025, USA.

Funding

Virology CoreP30AI027767 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Paul A. Goepfert · 1988 to 2026
$84.1M
Machine Learning and Deformable Model-based 4D Characterization of Cardiac Dyssynchrony from MRIR01HL127661 · NHLBI · RUTGERS, THE STATE UNIV OF N.J. · PI ALAREF, SUBHI, AXEL, LEON · 2015 to 2023
$5.4M
Translational Studies of Brain Circuitry Disrupted by AlcoholismK05AA017168 · NIAAA · STANFORD UNIVERSITY · PI SULLIVAN, EDITH VIONI · 2008 to 2017
$2.2M
NHLBI NIH HHS R01 HL127661NIAAA NIH HHS K05 AA017168NIAID NIH HHS P30 AI027767
6 · The paper itself

Abstract

We derive an algorithm to directly solve logistic regression based on cardinality constraint, group sparsity and use it to classify intra-subject MRI sequences (e.g. cine MRIs) of healthy from diseased subjects. Group cardinality constraint models are often applied to medical images in order to avoid overfitting of the classifier to the training data. Solutions within these models are generally determined by relaxing the cardinality constraint to a weighted feature selection scheme. However, these solutions relate to the original sparse problem only under specific assumptions, which generally do not hold for medical image applications. In addition, inferring clinical meaning from features weighted by a classifier is an ongoing topic of discussion. Avoiding weighing features, we propose to directly solve the group cardinality constraint logistic regression problem by generalizing the Penalty Decomposition method. To do so, we assume that an intra-subject series of images represents repeated samples of the same disease patterns. We model this assumption by combining series of measurements created by a feature across time into a single group. Our algorithm then derives a solution within that model by decoupling the minimization of the logistic regression function from enforcing the group sparsity constraint. The minimum to the smooth and convex logistic regression problem is determined via gradient descent while we derive a closed form solution for finding a sparse approximation of that minimum. We apply our method to cine MRI of 38 healthy controls and 44 adult patients that received reconstructive surgery of Tetralogy of Fallot (TOF) during infancy. Our method correctly identifies regions impacted by TOF and generally obtains statistically significant higher classification accuracy than alternative solutions to this model, i.e., ones relaxing group cardinality constraints.

Indexed as

AlgorithmsLogistic ModelsAdultHumansInfantMagnetic Resonance Imaging, CineTetralogy of FallotCine MRIClassificationGroup SparsityLogistic Regression

Identifiers

PMID27318592
PMCPMC5099121

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.