Evidence map›Paper›PMID 27317804›Full record

ArticleDevelopment (Cambridge, England)2016

A transcription factor network controls cell migration and fate decisions in the developing zebrafish pineal complex.

Sataree Khuansuwan, Joshua A Clanton, Benjamin J Dean, James G Patton, Joshua T Gamse

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Ontogenesis of the asymmetric parapineal organ in the zebrafish epithalamus.Frontiers in cell and developmental biology · 2022
    Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sataree KhuansuwanDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235, USA.ORCID 0000-0003-4888-4768
Joshua A ClantonDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235, USA.
Benjamin J DeanDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235, USA.
James G PattonDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235, USA James.G.Patton@Vanderbilt.edu Josh.Gamse@gmail.com.ORCID 0000-0001-5749-0870
Joshua T GamseDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235, USA James.G.Patton@Vanderbilt.edu Josh.Gamse@gmail.com.

Funding

Training Program in Stem Cell and Regenerative Developmental BiologyT32HD007502 · NICHD · VANDERBILT UNIVERSITY · PI WRIGHT, CHRISTOPHER V · 1997 to 2022
$5.4M
Genetic Analysis of the L/R Asymmetric Parapineal Neurons in the Zebrafish BrainR01HD054534 · NICHD · VANDERBILT UNIVERSITY · PI GAMSE, JOSHUA T · 2007 to 2011
$1.7M
A newly discovered feed-forward mechanism controls photoreceptor fateR01EY024354 · NEI · VANDERBILT UNIVERSITY · PI PATTON, JAMES G. · 2014 to 2016
$1.3M
NEI NIH HHS R01 EY024354NICHD NIH HHS R01 HD054534NICHD NIH HHS T32 HD007502
6 · The paper itself

Abstract

The zebrafish pineal complex consists of four cell types (rod and cone photoreceptors, projection neurons and parapineal neurons) that are derived from a single pineal complex anlage. After specification, parapineal neurons migrate unilaterally away from the rest of the pineal complex whereas rods, cones and projection neurons are non-migratory. The transcription factor Tbx2b is important for both the correct number and migration of parapineal neurons. We find that two additional transcription factors, Flh and Nr2e3, negatively regulate parapineal formation. Flh induces non-migratory neuron fates and limits the extent of parapineal specification, in part by activation of Nr2e3 expression. Tbx2b is positively regulated by Flh, but opposes Flh action during specification of parapineal neurons. Loss of parapineal neuron specification in Tbx2b-deficient embryos can be partially rescued by loss of Nr2e3 or Flh function; however, parapineal migration absolutely requires Tbx2b activity. We conclude that cell specification and migration in the pineal complex are regulated by a network of at least three transcription factors.

Indexed as

Gene Regulatory NetworksAnimalsBody PatterningCell CountCell LineageCell MovementGene DosageGene Expression Regulation, DevelopmentalHabenulaLarvaMosaicismMutationNeuronsPineal GlandRetinal Rod Photoreceptor CellsTranscription FactorsTranscription FactorsZebrafish ProteinsFlhNr2e3Parapineal organPineal complexTbx2bZebrafish

Identifiers

PMID27317804
PMCPMC4958332

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.