Evidence map›Paper›PMID 27317677›Full record

ArticleGenetics2016

Promotion of Cell Viability and Histone Gene Expression by the Acetyltransferase Gcn5 and the Protein Phosphatase PP2A in Saccharomyces cerevisiae.

Emily L Petty, Anne Lafon, Shannon L Tomlinson, Bryce A Mendelsohn, Lorraine Pillus

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Emily L PettyDivision of Biological Sciences, Molecular Biology, University of California, San Diego Moores Cancer Center, La Jolla, California 92093.ORCID 0000-0001-5932-9044
Anne LafonDivision of Biological Sciences, Molecular Biology, University of California, San Diego Moores Cancer Center, La Jolla, California 92093.
Shannon L TomlinsonDivision of Biological Sciences, Molecular Biology, University of California, San Diego Moores Cancer Center, La Jolla, California 92093.
Bryce A MendelsohnDivision of Biological Sciences, Molecular Biology, University of California, San Diego Moores Cancer Center, La Jolla, California 92093.
Lorraine PillusDivision of Biological Sciences, Molecular Biology, University of California, San Diego Moores Cancer Center, La Jolla, California 92093 lpillus@ucsd.edu.ORCID 0000-0002-8818-5227
University of California, San Diego · US

Funding

Pediatric Scientist Development Program (PSDP) [K12]K12HD000850 · NICHD · YALE UNIVERSITY · PI Sallie R. Permar · 1987 to 2026
$44.1M
SAS GENE FUNCTIONS AND CHROMATIN AND SILENCINGR01GM056469 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI PILLUS, LORRAINE · 1997 to 2007
$1.6M
Chromatin Regulation by Deacetylation and SUMO-Targeted Ubiquitin LigationR01GM090177 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PILLUS, LORRAINE · 2009 to 2012
$1.3M
NICHD NIH HHS K12 HD000850NIGMS NIH HHS R01 GM056469NIGMS NIH HHS R01 GM090177
6 · The paper itself

Abstract

Histone modifications direct chromatin-templated events in the genome and regulate access to DNA sequence information. There are multiple types of modifications, and a common feature is their dynamic nature. An essential step for understanding their regulation, therefore, lies in characterizing the enzymes responsible for adding and removing histone modifications. Starting with a dosage-suppressor screen in Saccharomyces cerevisiae, we have discovered a functional interaction between the acetyltransferase Gcn5 and the protein phosphatase 2A (PP2A) complex, two factors that regulate post-translational modifications. We find that RTS1, one of two genes encoding PP2A regulatory subunits, is a robust and specific high-copy suppressor of temperature sensitivity of gcn5∆ and a subset of other gcn5∆ phenotypes. Conversely, loss of both PP2A(Rts1) and Gcn5 function in the SAGA and SLIK/SALSA complexes is lethal. RTS1 does not restore global transcriptional defects in gcn5∆; however, histone gene expression is restored, suggesting that the mechanism of RTS1 rescue includes restoration of specific cell cycle transcripts. Pointing to new mechanisms of acetylation-phosphorylation cross-talk, RTS1 high-copy rescue of gcn5∆ growth requires two residues of H2B that are phosphorylated in human cells. These data highlight the potential significance of dynamic phosphorylation and dephosphorylation of these deeply conserved histone residues for cell viability.

Indexed as

AcetylationCell SurvivalChromatinDNA-Binding ProteinsHistone AcetyltransferasesHistonesHumansp300-CBP-Associated FactorProtein BindingProtein Phosphatase 2Protein Processing, Post-TranslationalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsChromatinDNA-Binding ProteinsGCN5 protein, S cerevisiaeHistone AcetyltransferasesHistonesp300-CBP-Associated FactorProtein Phosphatase 2Rts1 protein, S cerevisiaeSaccharomyces cerevisiae Proteinsacetylation (IOC2, PAB1, RHO2, MED6, ZDS1, PP2AB56)chromatinphosphorylationtranscription

Identifiers

PMID27317677
PMCPMC4981271
OpenAlexW2438965834

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.