ArticleBMC plant biology2016
Evolutionary relationships in Panicoid grasses based on plastome phylogenomics (Panicoideae; Poaceae).
Article in BMC plant biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.
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41 citing papers in PubMed, 96 citations in OpenAlex.
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- Genetic linkage mapping in Megathyrsus maximus (Jacq.) with multiple dosage markers.G3 (Bethesda, Md.) · 2025Article
- Characterization of the complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2025Article
- Comparative plastome analysis of Arundinelleae (Poaceae, Panicoideae), with implications for phylogenetic relationships and plastome evolution.BMC genomics · 2024Article
- Molecular Characterization and Phylogenetic Analysis of Centipedegrass [Current issues in molecular biology · 2024Article
- Phylogenomics and topological conflicts in the tribe Anthospermeae (Rubiaceae).Ecology and evolution · 2024Article
- Complete mitochondrial genome assembly ofFrontiers in plant science · 2024Article
- The mitochondrial genome of the diploid oat Avena longiglumis.BMC plant biology · 2023Article
- An Update of the Cenchrinae (Poaceae, Panicoideae, Paniceae) and a New Genus for the Subtribe to Clarify the Dubious Position of a Species ofPlants (Basel, Switzerland) · 2023Article
- Intrageneric structural variation in organelle genomes from the genusFrontiers in plant science · 2023Article
- The mitochondrial genome sequence of Abies alba Mill. reveals a high structural and combinatorial variation.BMC genomics · 2022Article
- Hybridisation and chloroplast capture between distinct Themeda triandra lineages in Australia.Molecular ecology · 2022Article
- Recovery of chloroplast genomes from medieval millet grains excavated from the Areni-1 cave in southern Armenia.Scientific reports · 2022Article
- Novel genome characteristics contribute to the invasiveness of Phragmites australis (common reed).Molecular ecology · 2022Article
- Paper Spray Mass Spectrometry on the Analysis of Phenolic Compounds inPlants (Basel, Switzerland) · 2021Article
- Comparative Analysis of the Chloroplast Genome for FourFrontiers in genetics · 2021Article
- An Overview of the Genetics and Genomics of theFrontiers in plant science · 2021Review
- Comparative Plastomes and Phylogenetic Analysis ofFrontiers in plant science · 2021Article
- Siberian larch (Larix sibirica Ledeb.) mitochondrial genome assembled using both short and long nucleotide sequence reads is currently the largest known mitogenome.BMC genomics · 2020Article
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Authors and funding
10 authors at 8 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundPanicoideae are the second largest subfamily in Poaceae (grass family), with 212 genera and approximately 3316 species. Previous studies have begun to reveal relationships within the subfamily, but largely lack resolution and/or robust support for certain tribal and subtribal groups. This study aims to resolve these relationships, as well as characterize a putative mitochondrial insert in one linage.
results35 newly sequenced Panicoideae plastomes were combined in a phylogenomic study with 37 other species: 15 Panicoideae and 22 from outgroups. A robust Panicoideae topology largely congruent with previous studies was obtained, but with some incongruences with previously reported subtribal relationships. A mitochondrial DNA (mtDNA) to plastid DNA (ptDNA) transfer was discovered in the Paspalum lineage.
conclusionsThe phylogenomic analysis returned a topology that largely supports previous studies. Five previously recognized subtribes appear on the topology to be non-monophyletic. Additionally, evidence for mtDNA to ptDNA transfer was identified in both Paspalum fimbriatum and P. dilatatum, and suggests a single rare event that took place in a common progenitor. Finally, the framework from this study can guide larger whole plastome sampling to discern the relationships in Cyperochloeae, Steyermarkochloeae, Gynerieae, and other incertae sedis taxa that are weakly supported or unresolved.
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