ArticleBioMed research international2016
Genome-Wide Identification and Characterization of bZIP Transcription Factors in Brassica oleracea under Cold Stress.
Article in BioMed research international, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed.
- Genome-wide systematic characterization ofPeerJ · 2026Article
- In-Depth Characterization ofPlants (Basel, Switzerland) · 2024Article
- The Impact of Salinity on Crop Yields and the Confrontational Behavior of Transcriptional Regulators, Nanoparticles, and Antioxidant Defensive Mechanisms under Stressful Conditions: A Review.International journal of molecular sciences · 2024Review
- "Genome-wide identification of bZIP gene family in Pearl millet and transcriptional profiling under abiotic stress, phytohormonal treatments; and functional characterization ofFrontiers in plant science · 2024Article
- QTL-seq and transcriptomic integrative analyses reveal two positively regulated genes that control the low-temperature germination ability of MTP-maize introgression lines.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Comparative phylogenomic insights of KCS and ELO gene families in Brassica species indicate their role in seed development and stress responsiveness.Scientific reports · 2023Article
- Cloning and functional analysis of theFrontiers in plant science · 2023Article
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- Genome-wide transcriptome profiling revealed biological macromolecules respond to low temperature stress inFrontiers in plant science · 2022Article
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- ThePeerJ · 2019Article
- Exploring transcription factors reveals crucial members and regulatory networks involved in different abiotic stresses in Brassica napus L.BMC plant biology · 2018Article
- Comparative root transcriptome of wild Arachis reveals NBS-LRR genes related to nematode resistance.BMC plant biology · 2018Article
- Genomic Prediction and Association Mapping of Curd-Related Traits in Gene Bank Accessions of Cauliflower.G3 (Bethesda, Md.) · 2018Article
- Integrated transcriptomics and metabolomics analysis to characterize cold stress responses in Nicotiana tabacum.BMC genomics · 2017Article
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Authors and funding
6 authors.
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No grant is acknowledged in the PubMed record.
Abstract
Cabbages (Brassica oleracea L.) are an important vegetable crop around world, and cold temperature is among the most significant abiotic stresses causing agricultural losses, especially in cabbage crops. Plant bZIP transcription factors play diverse roles in biotic/abiotic stress responses. In this study, 119 putative BolbZIP transcription factors were identified using amino acid sequences from several bZIP domain consensus sequences. The BolbZIP members were classified into 63 categories based on amino acid sequence similarity and were also compared with BrbZIP and AtbZIP transcription factors. Based on this BolbZIP identification and classification, cold stress-responsive BolbZIP genes were screened in inbred lines, BN106 and BN107, using RNA sequencing data and qRT-PCR. The expression level of the 3 genes, Bol008071, Bol033132, and Bol042729, was significantly increased in BN107 under cold conditions and was unchanged in BN106. The upregulation of these genes in BN107, a cold-susceptible inbred line, suggests that they might be significant components in the cold response. Among three identified genes, Bol033132 has 97% sequence similarity to Bra020735, which was identified in a screen for cold-related genes in B. rapa and a protein containing N-rich regions in LCRs. The results obtained in this study provide valuable information for understanding the potential function of BolbZIP transcription factors in cold stress responses.
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