Evidence map›Paper›PMID 27314015›Full record

ArticleBioMed research international2016

Development of a Rapid Point-of-Use DNA Test for the Screening of Genuity® Roundup Ready 2 Yield® Soybean in Seed Samples.

Dilip Chandu, Sudakshina Paul, Mathew Parker, Yelena Dudin, Jennifer King-Sitzes, Tim Perez, Don W Mittanck, Manali Shah, Kevin C Glenn, Olaf Piepenburg

Abstract read
In one paragraph

Article in BioMed research international, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Review
  3. Malaria diagnostic update: From conventional to advanced method.Journal of clinical laboratory analysis · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Dilip ChanduMonsanto Company, 800 N. Lindbergh Boulevard, St. Louis, MO 63017, USA.
Sudakshina PaulMonsanto Company, 800 N. Lindbergh Boulevard, St. Louis, MO 63017, USA.
Mathew ParkerTwistDx Limited, Minerva Building, Babraham Research Campus, Babraham, Cambridge CB22 3AT, UK.
Yelena DudinMonsanto Company, 800 N. Lindbergh Boulevard, St. Louis, MO 63017, USA.
Jennifer King-SitzesMonsanto Company, 800 N. Lindbergh Boulevard, St. Louis, MO 63017, USA.
Tim PerezMonsanto Company, 800 N. Lindbergh Boulevard, St. Louis, MO 63017, USA.
Don W MittanckMonsanto Company, 800 N. Lindbergh Boulevard, St. Louis, MO 63017, USA.
Manali ShahMonsanto Company, 800 N. Lindbergh Boulevard, St. Louis, MO 63017, USA.
Kevin C GlennMonsanto Company, 800 N. Lindbergh Boulevard, St. Louis, MO 63017, USA.
Olaf PiepenburgTwistDx Limited, Minerva Building, Babraham Research Campus, Babraham, Cambridge CB22 3AT, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Testing for the presence of genetically modified material in seed samples is of critical importance for all stakeholders in the agricultural industry, including growers, seed manufacturers, and regulatory bodies. While rapid antibody-based testing for the transgenic protein has fulfilled this need in the past, the introduction of new variants of a given transgene demands new diagnostic regimen that allows distinguishing different traits at the nucleic acid level. Although such molecular tests can be performed by PCR in the laboratory, their requirement for expensive equipment and sophisticated operation have prevented its uptake in point-of-use applications. A recently developed isothermal DNA amplification technique, recombinase polymerase amplification (RPA), combines simple sample preparation and amplification work-flow procedures with the use of minimal detection equipment in real time. Here, we report the development of a highly sensitive and specific RPA-based detection system for Genuity Roundup Ready 2 Yield (RR2Y) material in soybean (Glycine max) seed samples and present the results of studies applying the method in both laboratory and field-type settings.

Indexed as

DNA, PlantGenetic MarkersGenetic TestingGlycine maxMolecular Diagnostic TechniquesNucleic Acid Amplification TechniquesPlants, Genetically ModifiedSeedsSequence Analysis, DNATime FactorsDNA, PlantGenetic Markers

Identifiers

PMID27314015
PMCPMC4899603

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.