ArticleScientific reports2016
Integrated analysis of root microbiomes of soybean and wheat from agricultural fields.
Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.
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Who cites it
67 citing papers in PubMed.
- The root rhizosphere as a functional analog to the gut microbiome: Cases for microbial symbiosis and dysbiosis in parallel contexts.PNAS nexus · 2026Review
- Spatial Differentiation and Community Structure Characteristics of Soil Microorganisms at Variable Hyphosphere Distances in Forest Cultivation Systems ofMicroorganisms · 2026Article
- Study on the diversity, structure, and function of endophytic bacteria in seeds of genuine medicinal plants in gansu province.BMC plant biology · 2026Article
- Growth Response of Crop Legumes to Soil Microbiota Is Linked With Soil Nutrients and Planting History.Plant-environment interactions (Hoboken, N.J.) · 2026Article
- Impact of genotype and soil fertility on wheat rhizosphere microbiota under the trans-gangetic plain.Scientific reports · 2026Article
- Deciphering the rhizosphere microbiota composition of nature farming soybean (Glycine max L.) with different nodulation phenotypes.BMC plant biology · 2025Article
- Influence of genotype, nodule position, and edaphic factors on microbial diversity and assembly of pigeonpea (Cajanus cajan) root nodules in Indian soils.Environmental microbiome · 2025Article
- The rhizosphere of Phaseolus vulgaris L. cultivars hosts a similar bacterial community in local agricultural soils.PloS one · 2025Article
- Growth promotion and stress tolerance of soybean plants driven by seed treatment with synthetic bacterial community of soybean-associated beneficial bacteria.Frontiers in plant science · 2025Article
- Communication between Plants and Rhizosphere Microbiome: Exploring the Root Microbiome for Sustainable Agriculture.Microorganisms · 2023Review
- Harnessing NativeApplied and environmental microbiology · 2023Review
- Host-mediated gene engineering and microbiome-based technology optimization for sustainable agriculture and environment.Functional & integrative genomics · 2023Review
- Agroecological Management of the Grey Mould FungusPlants (Basel, Switzerland) · 2023Review
- Plant beneficial microbiome a boon for improving multiple stress tolerance in plants.Frontiers in plant science · 2023Review
- Effect of crop rotational position and nitrogen supply on root development and yield formation of winter wheat.Frontiers in plant science · 2023Article
- Core microbiota of wheat rhizosphere under Upper Indo-Gangetic plains and their response to soil physicochemical properties.Frontiers in plant science · 2023Article
- High throughput method of 16S rRNA gene sequencing library preparation for plant root microbial community profiling.Scientific reports · 2022Article
- Microbiome of Nodules and Roots of Soybean and Common Bean: Searching for Differences Associated with Contrasting Performances in Symbiotic Nitrogen Fixation.International journal of molecular sciences · 2022Article
- Microbial co-occurrence network in the rhizosphere microbiome: its association with physicochemical properties and soybean yield at a regional scale.Journal of microbiology (Seoul, Korea) · 2022Article
- Taxonomical and functional bacterial community profiling in disease-resistant and disease-susceptible soybean cultivars.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022Article
7 more citing papers are in PubMed but not listed here.
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Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Root associated bacteria are critical for plant growth and health. Understanding the composition and role of root microbiota is crucial toward agricultural practices that are less dependent on chemical fertilization, which has known negative effects on the environment and human health. Here we analyzed the root-associated microbiomes of soybean and wheat under agricultural field conditions. We took samples from 11 different production fields across a large geographic area. We used 16S rRNA pyrosequencing to explore root microbial communities and also obtained 2,007 bacterial isolates from rhizospheres, which were tested for the presence of plant growth promoting (PGP) traits in-vitro. We observed that pH and nitrate content correlated with beta diversity variability of rhizospheric bacterial communities despite the variable field conditions. We described the dominant bacterial groups associated to roots from both crops at a large geographic scale and we found that a high proportion of them (60-70%) showed more than 97% similarity to bacteria from the isolated collection. Moreover, we observed that 55% of the screened isolates presented PGP activities in vitro. These results are a significant step forward in understanding crop-associated microbiomes and suggest that new directions can be taken to promote crop growth and health by modulating root microbiomes.
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