Evidence map›Paper›PMID 27311714›Full record

ArticleThe Journal of biological chemistry2016

Super-resolution Microscopy Reveals Compartmentalization of Peroxisomal Membrane Proteins.

Silvia Galiani, Dominic Waithe, Katharina Reglinski, Luis Daniel Cruz-Zaragoza, Esther Garcia, Mathias P Clausen, Wolfgang Schliebs, Ralf Erdmann, Christian Eggeling

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 82 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. The peroxisome: an update on mysteries 3.0.Histochemistry and cell biology · 2024
    Review
  9. Article
  10. Far Red-Shifted CdTe Quantum Dots for Multicolour Stimulated Emission Depletion Nanoscopy.Chemphyschem : a European journal of chemical physics and physical chemistry · 2023
    Article
  11. Super-Resolution Imaging of Peroxisomal Proteins Using STED Nanoscopy.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Silvia GalianiFrom the Medical Research Council Human Immunology Unit and.
Dominic WaitheWolfson Imaging Centre, Weatherall Institute of Molecular Medicine, University of Oxford, Headley Way, Oxford OX3 9DS, United Kingdom.
Katharina ReglinskiFrom the Medical Research Council Human Immunology Unit and.
Luis Daniel Cruz-ZaragozaInstitute of Physiological Chemistry, Systemic Biochemistry, Ruhr University Bochum, Universitätsstrasse 150, 44801 Bochum, Germany, and.
Esther GarciaWolfson Imaging Centre, Weatherall Institute of Molecular Medicine, University of Oxford, Headley Way, Oxford OX3 9DS, United Kingdom.
Mathias P ClausenFrom the Medical Research Council Human Immunology Unit and MEMPHYS-Center for Biomembrane Physics, Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark.
Wolfgang SchliebsInstitute of Physiological Chemistry, Systemic Biochemistry, Ruhr University Bochum, Universitätsstrasse 150, 44801 Bochum, Germany, and.
Ralf ErdmannInstitute of Physiological Chemistry, Systemic Biochemistry, Ruhr University Bochum, Universitätsstrasse 150, 44801 Bochum, Germany, and.
Christian EggelingFrom the Medical Research Council Human Immunology Unit and Wolfson Imaging Centre, Weatherall Institute of Molecular Medicine, University of Oxford, Headley Way, Oxford OX3 9DS, United Kingdom, christian.eggeling@rdm.ox.ac.uk.
Medical Research Council · GBRuhr University Bochum · DEMRC Weatherall Institute of Molecular Medicine · GBUniversity of Oxford · GB

Funding

Medical Research Council G0902418Medical Research Council MC_UU_12010/9Medical Research Council MR/K01577X/1Wellcome Trust 104924/14/Z/14
6 · The paper itself

Abstract

Membrane-associated events during peroxisomal protein import processes play an essential role in peroxisome functionality. Many details of these processes are not known due to missing spatial resolution of technologies capable of investigating peroxisomes directly in the cell. Here, we present the use of super-resolution optical stimulated emission depletion microscopy to investigate with sub-60-nm resolution the heterogeneous spatial organization of the peroxisomal proteins PEX5, PEX14, and PEX11 around actively importing peroxisomes, showing distinct differences between these peroxins. Moreover, imported protein sterol carrier protein 2 (SCP2) occupies only a subregion of larger peroxisomes, highlighting the heterogeneous distribution of proteins even within the peroxisome. Finally, our data reveal subpopulations of peroxisomes showing only weak colocalization between PEX14 and PEX5 or PEX11 but at the same time a clear compartmentalized organization. This compartmentalization, which was less evident in cases of strong colocalization, indicates dynamic protein reorganization linked to changes occurring in the peroxisomes. Through the use of multicolor stimulated emission depletion microscopy, we have been able to characterize peroxisomes and their constituents to a yet unseen level of detail while maintaining a highly statistical approach, paving the way for equally complex biological studies in the future.

Indexed as

Carrier ProteinsCell LineHumansIntracellular MembranesMembrane ProteinsMicroscopyPeroxisomesPeroxisome-Targeting Signal 1 ReceptorReceptors, Cytoplasmic and NuclearRepressor ProteinsCarrier ProteinsMembrane ProteinsPeroxisome-Targeting Signal 1 ReceptorPEX14 protein, humanPEX5 protein, humanReceptors, Cytoplasmic and NuclearRepressor Proteinssterol carrier proteinsmembrane proteinmembrane traffickingmicroscopyperoxisomeprotein importSTED microscopysuper-resolution optical microscopy

Identifiers

PMID27311714
PMCPMC5016101
OpenAlexW2433308867

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.