Evidence map›Paper›PMID 27307959›Full record

ArticleIranian journal of pediatrics2016

Study on Rotavirus Infection and Its Genotyping in Children Below 5 Years in South West Iran.

Azarakhsh Azaran, Manoochehr Makvandi, Alireza Samarbafzadeh, Niloofar Neisi, Mohsen Hoseinzadeh, Mojtaba Rasti, Majid Teymurirad, Ali Teimoori, Mehran Varnaseri, Kamyar Makvandi

Abstract read
In one paragraph

Article in Iranian journal of pediatrics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Distribution of group aIranian journal of microbiology · 2023
    Article
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Azarakhsh AzaranVirology Department, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, IR Iran.
Manoochehr MakvandiVirology Department, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, IR Iran; Health Research Institute, Infectious and Tropical Diseases Research Center, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, IR Iran.
Alireza SamarbafzadehVirology Department, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, IR Iran; Health Research Institute, Infectious and Tropical Diseases Research Center, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, IR Iran.
Niloofar NeisiVirology Department, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, IR Iran.
Mohsen HoseinzadehAboozar Children's Hospital, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, IR Iran.
Mojtaba RastiVirology Department, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, IR Iran.
Majid TeymuriradVirology Department, School of Public Health, Tehran University of Medical Sciences, Tehran, IR Iran.
Ali TeimooriVirology Department, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, IR Iran.
Mehran VarnaseriDepartment of Infectious, Razi Hospital, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, IR Iran.
Kamyar MakvandiSchool of Medicine, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, IR Iran.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHuman rotaviruses are the most important agents for severe dehydrating diarrhea in children below 5 years old. Rotaviruses (RV) is a serious public health problem in developing and developed countries.

objectivesThe aim of this study was to determine the prevalence of rotavirus infection and their genotypes in children younger than 5 years of age with acute diarrhea in Ahvaz, Iran. MATERIALS AND

methodsFor this study, 200 stool samples from children below 5 years of age with acute diarrhea were collected between October 2011 and March 2012. Initially all stool samples were tested for rotavirus antigen by ELISA, and positive samples were confirmed by RT-PCR targeting the VP6 rotavirus gene. Determination of rotavirus genotypes was carried out by performing RT-PCR for G and P types. Altogether, 15 samples were sequenced.

resultsOut of 200 stool samples, 100 (50%) had rotavirus antigen detected by ELISA and 73 (36.5%) were found positive by RT-PCR. Of the rotavirus strains identified, only 63 (86.3%) were positive for both VP7 and VP4 while 10 (13.7%) strains were found nontypeable. Rotavirus infection accounts for 36.5% of gastroenteritis cases in samples from symptomatic children. The most prevalent rotavirus genotypes were G1P [8] (80%) followed by G2P [4] (20%).

conclusionsOur results suggest that group A rotavirus is a major pathogene of acute diarrhea in Ahvaz city. The genotypes circulating are similar with those of other countries.

Indexed as

DiarrheaGenotypesIranRotavirusRT-PCRSequencing

Identifiers

PMID27307959
PMCPMC4904489

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.