Evidence map›Paper›PMID 27307546›Full record

ArticleJournal of experimental botany2016

Root cap-dependent gravitropic U-turn of maize root requires light-induced auxin biosynthesis via the YUC pathway in the root apex.

Hiromi Suzuki, Ken Yokawa, Sayuri Nakano, Yuriko Yoshida, Isabelle Fabrissin, Takashi Okamoto, František Baluška, Tomokazu Koshiba

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
8.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 35 citations in OpenAlex.

  1. Investigation ofPlant signaling & behavior · 2024
    Article
  2. Article
  3. The Role of Light-Regulated Auxin Signaling in Root Development.International journal of molecular sciences · 2023
    Review
  4. Article
  5. Article
  6. Review
  7. Individuality, self and sociality of vascular plants.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Article
  8. Transformation of EndophyticFrontiers in bioengineering and biotechnology · 2021
    Article
  9. Gravity Reduced Nitrogen UptakeFrontiers in plant science · 2021
    Article
  10. The Roles of Auxin Biosynthesis YUCCA Gene Family in Plants.International journal of molecular sciences · 2019
    Review
  11. Review
  12. Review
  13. Review
  14. Sense of space: Tactile sense for exploratory behavior of roots.Communicative & integrative biology · 2018
    Article
  15. Control of Endogenous Auxin Levels in Plant Root Development.International journal of molecular sciences · 2017
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Hiromi SuzukiDepartment of Biological Sciences, Tokyo Metropolitan University, Tokyo 192-0397, Japan.ORCID 0000-0002-3362-9361
Ken YokawaDepartment of Biological Sciences, Tokyo Metropolitan University, Tokyo 192-0397, Japan IZMB, University of Bonn, D-53115 Bonn, Germany.ORCID 0000-0002-2400-081X
Sayuri NakanoDepartment of Biological Sciences, Tokyo Metropolitan University, Tokyo 192-0397, Japan.
Yuriko YoshidaDepartment of Biological Sciences, Tokyo Metropolitan University, Tokyo 192-0397, Japan.
Isabelle FabrissinDepartment of Biological Sciences, Tokyo Metropolitan University, Tokyo 192-0397, Japan.
Takashi OkamotoDepartment of Biological Sciences, Tokyo Metropolitan University, Tokyo 192-0397, Japan.
František BaluškaIZMB, University of Bonn, D-53115 Bonn, Germany koshiba-tomokazu@tmu.ac.jp baluska@uni-bonn.de.
Tomokazu KoshibaDepartment of Biological Sciences, Tokyo Metropolitan University, Tokyo 192-0397, Japan koshiba-tomokazu@tmu.ac.jp baluska@uni-bonn.de.
Tokyo Metropolitan University · JPUniversity of Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gravitropism refers to the growth or movement of plants that is influenced by gravity. Roots exhibit positive gravitropism, and the root cap is thought to be the gravity-sensing site. In some plants, the root cap requires light irradiation for positive gravitropic responses. However, the mechanisms regulating this phenomenon are unknown. We herein report that maize roots exposed to white light continuously for ≥1-2h show increased indole-3-acetic acid (IAA) levels in the root tips, especially in the transition zone (1-3mm from the tip). Treatment with IAA biosynthesis inhibitors yucasin and l-kynurenine prevented any increases in IAA content and root curvature under light conditions. Analyses of the incorporation of a stable isotope label from tryptophan into IAA revealed that some of the IAA in roots was synthesized in the root apex. Furthermore, Zmvt2 and Zmyuc gene transcripts were detected in the root apex. One of the Zmyuc genes (ZM2G141383) was up-regulated by light irradiation in the 0-1mm tip region. Our findings suggest that IAA accumulation in the transition zone is due to light-induced activation of Zmyuc gene expression in the 0-1mm root apex region. Light-induced changes in IAA levels and distributions mediate the maize root gravitropic U-turn.

Indexed as

Gene Expression Regulation, PlantGravitropismIndoleacetic AcidsKynurenineLightMeristemMetabolic Networks and PathwaysPlant Growth RegulatorsPlant Root CapTriazolesZea mays5-(4-chlorophenyl)-4H-1,2,4-triazole-3-thiolindoleacetic acidIndoleacetic AcidsKynureninePlant Growth RegulatorsTriazolesIndole-3-acetic acid (IAA) biosynthesislight dependentmaizeroot caproot gravitropismyucasinZmvt2Zmyuc.

Identifiers

PMID27307546
PMCPMC4973731
OpenAlexW2421913415

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.