Evidence map›Paper›PMID 27306056›Full record

ArticleVirology journal2016

Detection of chikungunya virus in saliva and urine.

Didier Musso, Anita Teissier, Eline Rouault, Sylviane Teururai, Jean-Jacques de Pina, Tu-Xuan Nhan

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Virology journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 36 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 2 pooled it
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 2 syntheses or guidelines pooled it, 69 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Immunocompetent mouse models revealed that S100A4Emerging microbes & infections · 2024
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Didier MussoLaboratoire de biologie médicale, Institut Louis Malardé, PO Box 30, 98713, Papeete, Tahiti, French Polynesia. dmusso@ilm.pf.
Anita TeissierPôle de recherche et de veille sur les maladies infectieuses émergentes, Institut Louis Malardé, Tahiti, French Polynesia.
Eline RouaultLaboratoire de biologie médicale, Institut Louis Malardé, PO Box 30, 98713, Papeete, Tahiti, French Polynesia.
Sylviane TeururaiLaboratoire de biologie médicale, Institut Louis Malardé, PO Box 30, 98713, Papeete, Tahiti, French Polynesia.
Jean-Jacques de PinaLaboratoire de biologie médicale, Institut Louis Malardé, PO Box 30, 98713, Papeete, Tahiti, French Polynesia.
Tu-Xuan NhanLaboratoire de biologie médicale, Institut Louis Malardé, PO Box 30, 98713, Papeete, Tahiti, French Polynesia.
Institut Louis Malardé · PF

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSaliva and urine have been used for arthropod-borne viruses molecular detection but not yet for chikungunya virus (CHIKV). We investigated the use of saliva and urine for molecular detection of CHIKV during the French Polynesian outbreak.

methodsDuring the French Polynesian chikungunya outbreak (2014-2015), we collected the same day blood and saliva samples from 60 patients with probable chikungunya (47 during the 1st week post symptoms onset and 13 after), urine was available for 39 of them. All samples were tested using a CHIKV reverse-transcription PCR.

resultsForty eight patients had confirmed chikungunya. For confirmed chikungunya presenting during the 1st week post symptoms onset, CHIKV RNA was detected from 86.1 % (31/36) of blood, 58.3 % (21/36) of saliva and 8.3 % (2/24) of urine. Detection rate of CHIKV RNA was significantly higher in blood compared to saliva. For confirmed chikungunya presenting after the 1st week post symptoms onset, CHIKV RNA was detected from 8.3 % (1/12) of blood, 8.3 % (1/12) of saliva and 0 % (0/8) of urine.

conclusionsIn contrast to Zika virus (ZIKV), saliva did not increased the detection rate of CHIKV RNA during the 1st week post symptoms onset. In contrast to ZIKV, dengue virus and West Nile virus, urine did not enlarged the window of detection of CHIKV RNA after the 1st week post symptoms onset. Saliva can be used for molecular detection of CHIKV during the 1st week post symptoms onset only if blood is impossible to collect but with a lower sensitivity compared to blood.

Indexed as

Chikungunya FeverChikungunya virusFemaleHumansMaleRNA, ViralSalivaUrineRNA, ViralArbovirusChikungunyaCHIKVFrench PolynesiaPCRSalivaUrine

Identifiers

PMID27306056
PMCPMC4910250
OpenAlexW2424598982

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.