Evidence map›Paper›PMID 27303811›Full record

ArticlePloS one2016

Overexpression of OsSAP16 Regulates Photosynthesis and the Expression of a Broad Range of Stress Response Genes in Rice (Oryza sativa L.).

Fei Wang, Robert A Coe, Shanta Karki, Samart Wanchana, Vivek Thakur, Amelia Henry, Hsiang-Chun Lin, Jianliang Huang, Shaobing Peng, William Paul Quick

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Fei WangNational Key Laboratory of Crop Improvement, MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei province, 430070, China.
Robert A CoeC4 Rice Center, International Rice Research Institute, Los Baños, Philippines.
Shanta KarkiC4 Rice Center, International Rice Research Institute, Los Baños, Philippines.
Samart WanchanaC4 Rice Center, International Rice Research Institute, Los Baños, Philippines.
Vivek ThakurC4 Rice Center, International Rice Research Institute, Los Baños, Philippines.
Amelia HenryCrop and Environmental Science Division, International Rice Research Institute, Los Baños, Philippines.
Hsiang-Chun LinC4 Rice Center, International Rice Research Institute, Los Baños, Philippines.
Jianliang HuangNational Key Laboratory of Crop Improvement, MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei province, 430070, China.
Shaobing PengNational Key Laboratory of Crop Improvement, MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei province, 430070, China.
William Paul QuickC4 Rice Center, International Rice Research Institute, Los Baños, Philippines.
International Rice Research Institute · PHHuazhong Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study set out to identify and characterize transcription factors regulating photosynthesis in rice. Screening populations of rice T-DNA activation lines led to the identification of a T-DNA mutant with an increase in intrinsic water use efficiency (iWUE) under well-watered conditions. Flanking sequence analysis showed that the T-DNA construct was located upstream of LOC_Os07g38240 (OsSAP16) encoding for a stress-associated protein (SAP). A second mutant identified with activation in the same gene exhibited the same phenotype; expression of OsSAP16 was shown to be enhanced in both lines. There were no differences in stomatal development or morphology in either of these mutants, although overexpression of OsSAP16 reduced stomatal conductance. This phenotype limited CO2 uptake and the rate of photosynthesis, which resulted in the accumulation of less biomass in the two mutants. Whole transcriptome analysis showed that overexpression of OsSAP16 led to global changes in gene expression consistent with the function of zinc-finger transcription factors. These results show that the gene is involved in modulating the response of rice to drought stress through regulation of the expression of a set of stress-associated genes.

Indexed as

Gene Expression Regulation, PlantBiomassCarbon DioxideGene Expression ProfilingGene OntologyMutationOryzaPhenotypePhotosynthesisPhylogenyPlant LeavesPlant ProteinsPlant StomataReverse Transcriptase Polymerase Chain ReactionStress, PhysiologicalWaterCarbon DioxidePlant ProteinsWater

Identifiers

PMID27303811
PMCPMC4909303
OpenAlexW2436674408

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.